TCONS_00073140-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073140-protein
Unique NameTCONS_00073140-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length492

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073140-protein ID=TCONS_00073140-protein|Name=TCONS_00073140-protein|organism=Clytia hemisphaerica|type=polypeptide|length=492bp
PVLLNLIKTSKEITKPLAGRLKYFSENWEKLTTDQWILQTIRGMTLDLIN
IPRQKVSPKDINMPKEQRELVDLEITELLRKGAIYPVKAETGQFVSTIFL
REKKNGKQRPIINLKNLNSYIVYEKFKMEGLKQMTEMLKKGDLMVKLDMK
DAYFNLPIRSDYRKFVRFTWKGCLYEFACLCFGLAPGPRIFTKILKVPVQ
FLRRLNIRLVIYLDDILVMGENLETVLQARDTIIYLLQNLGFVINQEKSV
MEPTVEIEFLGMLINSEEMTISLPEEKIENIVGLCQKVLQSKEITLRELS
KLIGKLTSTYAAVLPAPLNCKFLQMNLIKGLKNQLSYETTVKLDRQGKLE
LDWWIENLKLQNGRKINLGPPDLIIQSDAAKTGGWGAHCQGKKTGGQWNQ
WENQQHINIQETIAAELAIRTFTKLKKPKRLHLQIDNTVALSCILKMGST
KNEILTQYAKRIWDYLLKHQIMITVEYLPSRLNKEADRESRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045357XLOC_045357Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073140TCONS_00073140Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR000477RT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 359..492
e-value: 1.5E-6
score: 27.3
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 103..262
e-value: 3.7E-16
score: 59.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 82..264
score: 16.563
NoneNo IPR availableGENE3D3.30.70.270coord: 184..272
e-value: 8.7E-13
score: 47.7
NoneNo IPR availableGENE3D3.10.10.10coord: 49..183
e-value: 4.1E-21
score: 74.7
NoneNo IPR availableCDDcd09275RNase_HI_RT_DIRS1coord: 374..492
e-value: 3.62214E-31
score: 115.458
NoneNo IPR availableCDDcd03714RT_DIRS1coord: 147..264
e-value: 7.26652E-33
score: 120.141
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 58..463

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073140-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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