TCONS_00073059-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073059-protein
Unique Name	TCONS_00073059-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	320

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073059-protein ID=TCONS_00073059-protein|Name=TCONS_00073059-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
MYIFARSVRKLVANPAKLTQAALNTLAKRNARSYARSRIIEQQKVKTGAG
GFRAEKIGQAVLGGSAAAGIGALCFYGLGLSNDVGAIDKARFWPPEMRSM
IKSTYLYFLGSLSITAGSAYYLHRSALVTRMMSGNPWVVFAGSMAALIGS
SMACRSIEYEAGLNAKHLAWGVHSGVVGLVVAPLMFLGGPLILRAATYTA
GTVAALSLTAACAPDEKFLSWGGPLSLGLGGICVASLGGMFLPATSAAVP
VIQSLVTYGGLVVFGGFMLYDTQKIIKKAELATYSGKKYDPINASIGIYM
DTINIFIRIAMIMAGNNRRK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045296	XLOC_045296	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073059	TCONS_00073059	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006214	Bax_inhibitor_1-related

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006214	Bax inhibitor 1-related	PFAM	PF01027	Bax1-I	coord: 98..313 e-value: 1.1E-41 score: 142.8

Blast

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BLAST of TCONS_00073059-protein vs. Swiss-Prot (Human)
Match: GHITM (Growth hormone-inducible transmembrane protein OS=Homo sapiens GN=GHITM PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.552e-87
Identity = 154/336 (45.83%), Postives = 215/336 (63.99%), Query Frame = 0

Query:    6 RSVRKLVANPA--KLTQAALNTLAKRN-----ARSYARSRIIEQQKVKTG------------AGGFRAEKIGQAVLGGSAAAGIGALCFYGLGLSNDVGAIDKARFWPPEMRSMIKSTYLYFLGSLSITAGSAYYLHRSALVTRMMSGNPWVVFAGSMAALIGSSMACRSIEYEAGLNAKHLAWGVHSGVVGLVVAPLMFLGGPLILRAATYTAGTVAALSLTAACAPDEKFLSWGGPLSLGLGGICVASLGGMFLPATSAAVPVIQSLVTYGGLVVFGGFMLYDTQKIIKKAELAT-YSGKKYDPINASIGIYMDTINIFIRIAMIMA-GNNRRK 320
            R++   V +PA  K +    N++ K       +R YA    I  ++ +TG               F+ +++G+  + G AA G+GALC+YGLGLSN++GAI+KA  WP  ++  I STY+Y  GS+ +TA SA  + R+ ++   M    WV    + AA++G+ M  RSI Y+     KHLAW +HSGV+G VVAPL  LGGPL++RAA YTAG V  LS  A CAP EKFL+ G PL +GLG + V+SLG MFLP T+ A   + S+  YGGLV+F  F+LYDTQK+IK+AE++  Y  +KYDPIN+ + IYMDT+NIF+R+A ++A G NR+K
Sbjct:   10 RTLPSRVFHPAFTKASPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWFVAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPYDQSPGPKHLAWLLHSGVMGAVVAPLTILGGPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFVSSLGSMFLPPTTVAGATLYSVAMYGGLVLFSMFLLYDTQKVIKRAEVSPMYGVQKYDPINSMLSIYMDTLNIFMRVATMLATGGNRKK 345

The following BLAST results are available for this feature:

BLAST of TCONS_00073059-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073059-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
GHITM	1.552e-87	45.83	Growth hormone-inducible transmembrane protein OS=...	[more]

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TCONS_00073059-protein (polypeptide) - C. hemisphaerica

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