TCONS_00073025-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073025-protein
Unique NameTCONS_00073025-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length497

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073025-protein ID=TCONS_00073025-protein|Name=TCONS_00073025-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MIYNVMADKENDEIITIEAVCEFLQKRNGKARQAELVNHFRKQLNSPNTK
VRARQEFRDILQLVTATKTENGEKYVVLVMTANTTSTSNSVITRKSQRPL
SIRKEIGRSRCENLLLPLTPRSIDYSDDETDGSIHSVADSGMGSETSSIR
SVASLRQEMSRRLPGSLSMDSIDTLMDGTEDDLEEDLGLTETSEVLPEEK
SWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVK
FIMGANVDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSG
KKPRDVVKDTVAADVQRKLGRSLILDPNTVLDSRIVAPTLRRNLNKPQRS
RPSSFIKTLSDGEMSPMATPESVRKNIKSIGASAQRSMSFLKKKKKDKLR
DEQLSPRSRRKTPDDEHPQDAPWKQEWNEKQRRRPKSIEISSPTEVSSTT
TTPTKESGGKPPTIRSNLTPTRYQNIAQQPVPPPQNEQLAVITVPDR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073025TCONS_00073025Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR011991WHTH_DNA-bd_dom
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 232..261
e-value: 3.4E-4
score: 30.0
coord: 265..295
e-value: 0.046
score: 22.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 232..264
score: 11.247
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 265..298
score: 11.808
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 10..78
e-value: 5.7E-5
score: 22.3
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 196..436
e-value: 8.8E-25
score: 86.4
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 203..297
e-value: 2.5E-12
score: 47.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 203..303
score: 22.941
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 202..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..372
NoneNo IPR availableCDDcd00204ANKcoord: 203..306
e-value: 3.40954E-22
score: 90.9058

Blast
BLAST of TCONS_00073025-protein vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.614e-24
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 0
Query:  197 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 320
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395          
The following BLAST results are available for this feature:
BLAST of TCONS_00073025-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC1.614e-2440.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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