TCONS_00073009-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073009-protein
Unique NameTCONS_00073009-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length278

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073009-protein ID=TCONS_00073009-protein|Name=TCONS_00073009-protein|organism=Clytia hemisphaerica|type=polypeptide|length=278bp
MAAEKEKTAPFVKKFNGIEKLSSEEFLLIFRKYDKDGNGYIERGELDRFL
SDILRQKLANAQDLDELRKTILDKYDTNADGKISLSELALILPTQENYLS
AIVNNNRLHVVDFMKIWYHYDRDKSGYLEKSELKGFIRDFLLRSLKFDDK
ITPQVIDERTEKVLETFDKNKDGKIEISELAKFLNVQDNFLMKFKNENDA
LSAEQFDAIFNHYDTDGNGYIEDVELLAFLRDLLQNKRRDPTSKDLEMYR
SCILEISDKDNDGKLSKAELKILLIPNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045283XLOC_045283Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073009TCONS_00073009Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 248..277
e-value: 87.0
score: 2.1
coord: 25..53
e-value: 1.2E-4
score: 31.4
coord: 205..233
e-value: 1.1E-4
score: 31.6
coord: 66..95
e-value: 3.5
score: 13.4
coord: 112..140
e-value: 0.024
score: 23.8
coord: 159..187
e-value: 0.33
score: 20.0
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 207..271
e-value: 6.0E-8
score: 33.0
coord: 29..88
e-value: 2.5E-9
score: 37.4
coord: 114..183
e-value: 6.5E-9
score: 36.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 21..56
score: 13.063
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 63..98
score: 9.52
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 201..236
score: 13.398
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 155..190
score: 11.612
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 108..143
score: 10.943
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 253..278
score: 8.627
IPR002048EF-hand domainCDDcd00051EFhcoord: 205..270
e-value: 2.95844E-7
score: 45.2313
IPR002048EF-hand domainCDDcd00051EFhcoord: 112..184
e-value: 7.45215E-8
score: 47.1573
IPR002048EF-hand domainCDDcd00051EFhcoord: 25..89
e-value: 1.91541E-10
score: 54.0909
NoneNo IPR availableGENE3D1.10.238.10coord: 262..275
e-value: 0.2
score: 11.1
NoneNo IPR availableGENE3D1.10.238.10coord: 80..126
e-value: 1.3E-7
score: 30.8
coord: 4..39
e-value: 1.6E-5
score: 24.1
coord: 172..220
e-value: 1.9E-11
score: 43.1
NoneNo IPR availableGENE3D1.10.238.10coord: 221..261
e-value: 3.7E-11
score: 42.6
coord: 40..79
e-value: 2.4E-12
score: 46.5
coord: 127..171
e-value: 5.8E-13
score: 48.4
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 121..133
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 76..88
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 168..180
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 258..270
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 34..46
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 214..226
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 24..184
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 161..274

Blast
[Close]
BLAST of TCONS_00073009-protein vs. Swiss-Prot (Human)
Match: CALB2 (Calretinin OS=Homo sapiens GN=CALB2 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.357e-56
Identity = 105/281 (37.37%), Postives = 176/281 (62.63%), Query Frame = 0 
Query:    3 AEKEKTAPFVKKFNGIEKLSSEEFLLIFRKYDKDGNGYIERGELDRFLSDILRQK-----LANAQDLDELRKTILDKYDTNADGKISLSELALILPTQENYLSAIVNNNRLHV---VDFMKIWYHYDRDKSGYLEKSELKGFIRDFLLRSLKFDDKITPQVIDERTEKVLETFDKNKDGKIEISELAKFLNVQDNFLMKFKNENDALSAEQFDAIFNHYDTDGNGYIEDVELLAFLRDLLQNKRRDPTSKDLEMYRSCILEISDKDNDGKLSKAELKILLI 275
            A  ++  P++     + +L++ +FL I++ +D DGNGYIE  EL+ F  ++ + +     ++ + +  E  K  + KYD N+DGKI ++ELA ILPT+EN+L       R HV    +FM+ W  YD D+SGY+E +ELKGF+ D L ++ +  D+  P+ + E T+ +L  FD N DGK+ +SE+++ L VQ+NFL+KF+     L++E+F+AIF  YD D +GYI++ EL A L+DL +  +++   + L  YR  ++ +++    GKL + +L+I+L 
Sbjct:    2 AGPQQQPPYLH----LAELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKEFMQKYDKNSDGKIEMAELAQILPTEENFLLCF----RQHVGSSAEFMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDE--PK-LQEYTQTILRMFDLNGDGKLGLSEMSRLLPVQENFLLKFQGMK--LTSEEFNAIFTFYDKDRSGYIDEHELDALLKDLYEKNKKEMNIQQLTNYRKSVMSLAEA---GKLYRKDLEIVLC 266
The following BLAST results are available for this feature:
BLAST of TCONS_00073009-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALB21.357e-5637.37Calretinin OS=Homo sapiens GN=CALB2 PE=2 SV=2[more]
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