TCONS_00072993-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072993-protein
Unique NameTCONS_00072993-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length621

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072993-protein ID=TCONS_00072993-protein|Name=TCONS_00072993-protein|organism=Clytia hemisphaerica|type=polypeptide|length=621bp
MAARCTLLPGIKKRKKINERMADARTESVTSVDSECESVDSAAICTNTTT
NKLNTKYPDFQHSQTILQSMNQHRKEITKLCDVVLKIDDVQIHAHRSVLA
SCSEYFMAMFTNDMKETYESIVVMKDVKPDVISDLVDFVYTGHLDVNNDN
VESTLEHSSLIQLPKAIDICCDFLEKQLDSTNCIGIRKFAALYQCTKDFL
IKVDNFMKRHFLEIVESEEFVTLSITELKNLLCDQSLKVDNEEQVYNVVM
KWVSHDQEDRGPKLHVLLSQVKLPLLSRECITDVLDKENLIKQNLKCRDL
LDEAKNYHLQPENHSKLRNWRTSPRFSTAGLLFAVGGKETGELITDKVEC
FCLYEKKWKSVASLSCQRQQLCVCELNGNIYAIAGTDGTTRMNSVEMYSF
EKNTWTATPSLQVCRSGAGAVSLRDVMYVLSGYDGRVCLTSVERYDDEAC
RWDYVSPMHIGRSFPGVAGLGGRLFIVGGNDGTAFLNTCEVYDPISDRWS
HIAPMNTARAGIGCAVQDGILYAAGGFDGIQRLDTVEIYEPRMNAWSTAP
SMTYSRDGVSLASYGGYIHAIGGIDGPSYLTSVEYYDPNSERWLTAFSMQ
KSRAAAGVAVLSSDKFISIGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045275XLOC_045275Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072993TCONS_00072993Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR011705BACK
IPR000210BTB/POZ_dom
IPR017096BTB-kelch_protein
IPR015915Kelch-typ_b-propeller
IPR011043Gal_Oxase/kelch_b-propeller
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 567..613
e-value: 4.1E-6
score: 36.3
coord: 426..472
e-value: 0.0019
score: 27.5
coord: 520..566
e-value: 1.2E-12
score: 58.1
coord: 473..519
e-value: 1.1E-13
score: 61.5
coord: 379..425
e-value: 5.2E-12
score: 55.9
coord: 331..378
e-value: 1.7E-4
score: 31.0
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 415..458
e-value: 2.3E-8
score: 33.4
coord: 508..552
e-value: 2.5E-13
score: 49.3
coord: 556..593
e-value: 1.6E-7
score: 30.7
coord: 462..506
e-value: 2.4E-12
score: 46.1
coord: 371..411
e-value: 8.6E-11
score: 41.2
IPR011705BTB/Kelch-associatedSMARTSM00875BACK_2coord: 183..286
e-value: 6.8E-27
score: 105.3
IPR011705BTB/Kelch-associatedPFAMPF07707BACKcoord: 183..284
e-value: 6.0E-27
score: 93.6
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 81..178
e-value: 1.4E-26
score: 104.3
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 71..177
e-value: 3.8E-27
score: 94.6
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 81..148
score: 22.381
IPR017096BTB-kelch proteinPIRSFPIRSF037037Kelch_gigaxonincoord: 36..616
e-value: 4.6E-176
score: 583.6
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 317..475
e-value: 4.3E-33
score: 114.0
coord: 476..620
e-value: 3.4E-33
score: 114.4
NoneNo IPR availableGENE3D3.30.710.10coord: 65..219
e-value: 1.5E-32
score: 112.0
NoneNo IPR availableCDDcd14735BACK_Kelchcoord: 178..237
e-value: 5.32097E-15
score: 69.4299
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 318..594
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 61..176

Blast
[Close]
BLAST of TCONS_00072993-protein vs. Swiss-Prot (Human)
Match: KLH20 (Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE=1 SV=4)

HSP 1 Score: 431.409 bits (1108), Expect = 3.827e-144
Identity = 230/585 (39.32%), Postives = 339/585 (57.95%), Query Frame = 0 
Query:   38 SVDSAAICTNTTTNKLNTKYPDF--------QHSQTILQSMNQHRKEITKLCDVVLKIDDVQIHAHRSVLASCSEYFMAMFTNDMKETYESIVVMKDVKPDVISDLVDFVYTGHLDVNNDNVESTLEHSSLIQLPKAIDICCDFLEKQLDSTNCIGIRKFAALYQCTKDFLIKVDNFMKRHFLEIVESEEFVTLSITELKNLLCDQSLKVDNEEQVYNVVMKWVSHDQEDRGPKLHVLLSQVKLPLLSRECITDVLDKENLIKQNLKCRDLLDEAKNYHLQPENHSKLRNWRTSPR--FSTAGLLFAVGGKETGELITDKVECFCLYEKKWKSVASLSCQRQQLCVCELNGNIYAIAGTDGTTRMNSVEMYSFEKNTWTA-TPSLQVCRSGAGAVSLRDVMYVLSGYDGRVCLTSVERYDDEACRWDYVSPMHIGRSFPGVAGLGGRLFIVGGNDGTAFLNTCEVYDPISDRWSHIAPMNTARAGIGCAVQDGILYAAGGFDGIQRLDTVEIYEPRMNAWSTAPSMTYSRDGVSLASYGGYIHAIGGIDGPSYLTSVEYYDPNSERWLTAFSMQKSRAAAGVAVL 611
             +D  + CT    NKL    P          +H +  L+ +N  RK   +LCDVVL +   +I+AHR +L++CS YF AMFT ++ E+ ++ VV++D+    +  L+DF YT  + V   NV++ L  + L+QL +  + CC+FL++QLD +NC+GIR FA  + C ++ L   D F + +F E++ESEEF+ L   +L +++    L V +EEQV+N VM WV +  ++R P+L  +L  V+LPLLS + +   +  + LIK + +CRDL+DEAKNY L P+    ++  RT PR       +LFAVGG  +G+ I+  VE +     +W+ VAS+S +R  + V  L+  +YA+ G DG++ +NSVE Y  + N W++       CR+  G   L   +Y + G DG  CL  VERYD +  +W  V+ M   R    VA LGG L+ VGG+DGT+ LNT E Y+P  +RW  IAPM T R  +GCAV   ++YA GG D    L + E Y PR N WS   +MT  R GV LA   G + A+GG DG +YL ++E +DP++  W     M   R   GV V+
Sbjct:   18 GMDVTSRCTLGDPNKLPEGVPQPARMPYISDKHPRQTLEVINLLRKH-RELCDVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYTSQITVEEGNVQTLLPAACLLQLAEIQEACCEFLKRQLDPSNCLGIRAFADTHSC-RELLRIADKFTQHNFQEVMESEEFMLLPANQLIDIISSDELNVRSEEQVFNAVMAWVKYSIQERRPQLPQVLQHVRLPLLSPKFLVGTVGSDPLIKSDEECRDLVDEAKNYLLLPQERPLMQGPRTRPRKPIRCGEVLFAVGGWCSGDAIS-SVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGFLYAVGGQDGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRSGVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVI 599
The following BLAST results are available for this feature:
BLAST of TCONS_00072993-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH203.827e-14439.32Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE... [more]
back to top