TCONS_00072963-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072963-protein
Unique NameTCONS_00072963-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length341

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072963-protein ID=TCONS_00072963-protein|Name=TCONS_00072963-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
MTDDTPHHQIQIGQTINSTYIMPMFVNSVDIPETVNGEETDASGDESVEE
EGQQVIEEDGENDGNEEDERNDRRAANEIPNVPQEVMKINFDIIQTKVIS
KGRRKFTVYVIIVMETPGLDADKAIIERRYNEFNALHKGLRKEFPKVMKN
VPHFPRKKFFGSSLLKNLVEDRCRLFEKYLRYLYHQEGVAESKAFQKFFV
KSHLKHATELLKCEQYEESCKQYQLAAHLQKKLGTGNMEDRIIALCGVVE
TCKNMSDYKLANIRGTECLEILKLSSNPTQYDVSNPFLLGLMTSVIDARK
RENVDVQSWKGLDIDFRKCKEQSSNGHDQIESLRVLLVKKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045262XLOC_045262Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072963TCONS_00072963Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 92..202
e-value: 2.6E-14
score: 63.5
IPR001683Phox homologous domainPFAMPF00787PXcoord: 97..200
e-value: 3.8E-16
score: 59.0
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 69..209
e-value: 3.1E-24
score: 84.8
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 87..206
score: 17.071
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 88..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..78

Blast
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BLAST of TCONS_00072963-protein vs. Swiss-Prot (Human)
Match: SNX20 (Sorting nexin-20 OS=Homo sapiens GN=SNX20 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.573e-18
Identity = 57/187 (30.48%), Postives = 95/187 (50.80%), Query Frame = 0 
Query:   87 MKINFDIIQTKVISKGRRKFTVYVIIVMETPGLDADKAIIERRYNEFNALHKGLRKEFPKVMKNVPHFPRKKFFGSSLLKNLVEDRCRLFEKYLRYLYHQEGVAESKAFQKFFVKSHLKHATELLKCEQYEESCKQYQLAAHLQKKLGTGNMEDRIIALCGVVETCKNMSDYKLANIRGTECLEILK 273
            +K+ F+I   ++  +   KF VY IIV++T   D +KA++ERRY++F  L K L K F + +++V  FPRK   G +  + ++ +R R  ++YL  LY    V  S+ F  F  +  L+ A   L+  QY  + +       LQ+KL        + ALC V+   +++     A   G   L+ L+
Sbjct:   74 VKLLFEIASARIEERKVSKFVVYQIIVIQTGSFDNNKAVLERRYSDFAKLQKALLKTFREEIEDV-EFPRKHLTG-NFAEEMICERRRALQEYLGLLYAIRCVRRSREFLDFLTRPELREAFGCLRAGQYPRALELLLRVLPLQEKLTAHCPAAAVPALCAVLLCHRDLDRPAEAFAAGERALQRLQ 258
The following BLAST results are available for this feature:
BLAST of TCONS_00072963-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX201.573e-1830.48Sorting nexin-20 OS=Homo sapiens GN=SNX20 PE=1 SV=... [more]
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