TCONS_00072959-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072959-protein
Unique NameTCONS_00072959-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length274

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072959-protein ID=TCONS_00072959-protein|Name=TCONS_00072959-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
MEKFLRIFSKTPSLIGMIHVRALPGTPLYKSGSFDNIVDKAKEEAQVLIE
AGIDGLMIENMHDIPYMNRSVGPEIISSMTVISHEVKNIAKTIPCGIQIL
SGCNQAALAVAKAASLQYIRAEGFVFAHVADEGIIQSDAGSLLRYRKSID
ADDIMIWTDIKKKHSSHQITSDVSLSETCHAAEFFLSDGLIITGSSTGQA
ASVTDLKDAVSTVSIPAIIGSGISPDNVENFSKAHAMIVGSYFKKNGLWS
NEICMDRLNSLVRAVTQLQNEPQR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045261XLOC_045261Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072959TCONS_00072959Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005137BtpA
IPR011060RibuloseP-bd_barrel
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005137Membrane complex biogenesis protein, BtpA familyPIRSFPIRSF005956BtpAcoord: 2..271
e-value: 6.9E-83
score: 275.6
IPR005137Membrane complex biogenesis protein, BtpA familyPFAMPF03437BtpAcoord: 13..266
e-value: 7.3E-64
score: 215.5
IPR005137Membrane complex biogenesis protein, BtpA familyTIGRFAMTIGR00259TIGR00259coord: 13..267
e-value: 3.4E-62
score: 208.2
IPR005137Membrane complex biogenesis protein, BtpA familyPRODOMPD011184coord: 34..207
e-value: 4.0E-54
score: 536.0
NoneNo IPR availableGENE3D3.20.20.60coord: 17..107
e-value: 0.0011
score: 17.8
NoneNo IPR availableGENE3D3.20.20.380coord: 108..273
e-value: 3.5E-24
score: 84.9
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 3..264

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072959-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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