TCONS_00072901-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072901-protein
Unique NameTCONS_00072901-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length618

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072901-protein ID=TCONS_00072901-protein|Name=TCONS_00072901-protein|organism=Clytia hemisphaerica|type=polypeptide|length=618bp
MNQMECPICGLSFSKDKIEKHADTCLRFPKEKATTRRRSSGQTPASSVSK
SLGDFFTKQNKRKRPISPEAKLKKKCDENSTDSIIISESPPLPSIDIKTD
GDKNQVDNKPINGFQETLLKWSKENNQVKVENTLSGSDKTTNEEIKPIES
NDKDDIIVERKLNETIAASSTKIETNQKQRKTKKAQIALGKIPLADQMRP
TNFDTYFGQEAVNSNKVLKELFYNKRIPSLLLWGPPGCGKTSLANIIAQK
CKEEAQYRFVTLSATMAGVNDVKEAVKIAKNERKLTRRQTVLFIDEVHRF
NKLQQDSFLPHVEDGTIVLIGATTENPSFHLNNALLSRCKLIVLTKLSVT
NIKNILQNAVERLDGHEKTESSSKENGDLGFRFTLEEGVLKAIAEYAGGD
ARVALNTLDMLLQSKLNPANIDQTFYITVQEVKEDMKRGYVNYDRNGDEH
YDIISALHKSIRGGDQDAAMYWLARMLEGGESPLYIARRLVRIASEDIGL
GDPLALNQAVSAYQACHFIGMPECDVILAQATTYLALAAKSIEVYEAYTK
AKQLVKACNGPQPEVPIHLRNAPTKMMKNLGYGKGYKYTPKCLDDPEQEY
LPLSLKDTKFFTEENGNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045233XLOC_045233Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072901TCONS_00072901Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR032423AAA_assoc_2
IPR021886MgsA_C
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
IPR008921DNA_pol3_clamp-load_cplx_C
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 269..289
NoneNo IPR availableGENE3D1.10.3710.10coord: 543..618
e-value: 1.1E-20
score: 73.2
NoneNo IPR availableGENE3D3.40.50.300coord: 174..335
e-value: 5.1E-26
score: 90.8
NoneNo IPR availableGENE3D1.20.272.10coord: 447..541
e-value: 7.6E-41
score: 137.9
NoneNo IPR availableGENE3D1.10.8.60coord: 336..437
e-value: 5.5E-20
score: 70.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..107
NoneNo IPR availableCDDcd00009AAAcoord: 216..343
e-value: 8.01741E-19
score: 82.9643
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 226..347
e-value: 1.0E-13
score: 61.6
IPR032423AAA C-terminal domainPFAMPF16193AAA_assoc_2coord: 383..462
e-value: 4.1E-24
score: 84.6
IPR021886MgsA AAA+ ATPase C-terminalPFAMPF12002MgsA_Ccoord: 463..615
e-value: 1.9E-55
score: 187.2
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 230..343
e-value: 2.3E-15
score: 57.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 192..414
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 447..614

Blast
[Close]
BLAST of TCONS_00072901-protein vs. Swiss-Prot (Human)
Match: WRIP1 (ATPase WRNIP1 OS=Homo sapiens GN=WRNIP1 PE=1 SV=2)

HSP 1 Score: 472.626 bits (1215), Expect = 1.668e-159
Identity = 240/447 (53.69%), Postives = 304/447 (68.01%), Query Frame = 0 
Query:  186 QIALGKIPLADQMRPTNFDTYFGQ-EAVNSNKVLKELFYNKRIPSLLLWGPPGCGKTSLANIIAQKCKEEAQYRFVTLSATMAGVNDVKEAVKIAKNERKLTRRQTVLFIDEVHRFNKLQQDSFLPHVEDGTIVLIGATTENPSFHLNNALLSRCKLIVLTKLSVTNIKNILQNAVERLDGHEKTESSSKENGDLGFR--------FTLEEGVLKAIAEYAGGDARVALNTLDMLLQSKLNPANI-----DQTF-----YITVQEVKEDMKRGYVNYDRNGDEHYDIISALHKSIRGGDQDAAMYWLARMLEGGESPLYIARRLVRIASEDIGLGDPLALNQAVSAYQACHFIGMPECDVILAQATTYLALAAKSIEVYEAYTKAKQLVKACNGPQPEVPIHLRNAPTKMMKNLGYGKGYKYTPKCLDDPEQEYLPLSLKDTKFFTE 613
            Q+  GK PLAD MRP     YFGQ +AV  + +L+ L     IPSL+LWGPPGCGKT+LA+IIA   K+ +  RFVTLSAT A  NDV++ +K A+NE+   +R+T+LFIDE+HRFNK QQD+FLPHVE GTI LIGATTENPSF +N ALLSRC++IVL KL V  +  IL  A+  L  H     SS+    L             +E+  +  +A  + GDAR  LN L + + ++L+   +      Q++      IT  +VKE ++R ++ YDR G+EHY+ ISALHKS+RG DQ+A++YWLARMLEGGE PLY+ARRLVR ASEDIGL DP AL QAV+AYQ CHFIGMPEC+V+LAQ   Y A A KSIEVY AY   K  ++   GP P VP+HLRNAPT++MK+LGYGKGYKY P   +  +QEYLP  L+   FF +
Sbjct:  220 QMLQGK-PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNSKKHS-IRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQDTFLPHVECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGIH--VLDSSRPTDPLSHSSNSSSEPAMFIEDKAVDTLAYLSDGDARAGLNGLQLAVLARLSSRKMFCKKSGQSYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDQNASLYWLARMLEGGEDPLYVARRLVRFASEDIGLADPSALTQAVAAYQGCHFIGMPECEVLLAQCVVYFARAPKSIEVYSAYNNVKACLRNHQGPLPPVPLHLRNAPTRLMKDLGYGKGYKYNPMYSEPVDQEYLPEELRGVDFFKQ 662
The following BLAST results are available for this feature:
BLAST of TCONS_00072901-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WRIP11.668e-15953.69ATPase WRNIP1 OS=Homo sapiens GN=WRNIP1 PE=1 SV=2[more]
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