TCONS_00072900-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072900-protein
Unique NameTCONS_00072900-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length612

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072900-protein ID=TCONS_00072900-protein|Name=TCONS_00072900-protein|organism=Clytia hemisphaerica|type=polypeptide|length=612bp
YDSFQKVCCELREIRLLEIGSELKMDPEKQRLTENNFELQENEAYLAEEE
FGEKSNQNQRIDVEEEQKEISNTPKGCKEDEDTAFSNPSNTENSDSQSEP
LKQVDVDEFLIHIGQFGRAQKLLLLMFYLLEVPHSYHTLSWFFTGHSPPW
RCSLTNNLTRAQCNSTAVYDIGDPFYEQRCFMERDAWNYTLPRSYSIVTE
WDLVCDKKEYPFLANSLMWIGWAAGAFVLGFVSDKYGRKKVLMISFSGMI
TFAFTCAFLHQFWIYALMAFLIGFCQGGIALTIYVMASEFVGPKYKSLAS
GALTGLTYTLSLCLLSFQSWLMPEWRKLLVVTSFPYLILLFSFGLMPESI
RWLRLNLKSQECEDVLRSICQFNGRKWPDIVLRPPLKTEDRNGSLFSLFT
HSRLATNTLVQGFVWFVIGQVYFGISLASDQLGGNIYRDFVLTSLVGIPG
NILVIVLTNKYGRKPTLIGSMAVGSFSCIGVSLINPLSELIWLRVTFGMI
GQLCLALAFSSMYSWSLELMPTIIRSQAIGLLGVLIRFGGSSAPWVSQWL
EHFHYTLPFAVMGSLALVASGLCVRLPETLNVPTIETIDDAKRHLKGEEF
AKPLTNNIISNA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045232XLOC_045232Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072900TCONS_00072900Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 121..363
e-value: 1.3E-24
score: 86.1
NoneNo IPR availableGENE3D1.20.1250.20coord: 386..603
e-value: 5.6E-21
score: 74.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..99
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 216..544
e-value: 3.9E-26
score: 91.7
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 229..245
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 123..581
score: 16.461
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 213..577
e-value: 2.52054E-29
score: 117.415
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 213..581

Blast
BLAST of TCONS_00072900-protein vs. Swiss-Prot (Human)
Match: S22A3 (Solute carrier family 22 member 3 OS=Homo sapiens GN=SLC22A3 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.291e-55
Identity = 148/537 (27.56%), Postives = 248/537 (46.18%), Query Frame = 0
Query:  107 DEFLIHIGQFGRAQKLLLLMFYLLEVPHSYHTLSWFFTGHSPP--W-----------RCSLTN----NLT------------RAQC------------NSTAVYDIGDPF--YEQRC---FMERDAWNYTLPRSYSIVTEWDLVCDKKEYPFLANSLMWIGWAAGAFVLGFVSDKYGRKKVLMISFSGMITFAFTCAFLHQFWIYALMAFLIGFCQGGIALTIYVMASEFVGPKYKSLASGALTGLTYTLSLCLLSFQSWLMPEWRKLLVVTSFPYLILLFSFGLMPESIRWLRLNLKSQECEDVLRSICQFNGR----KWPDIVLRPPLKTEDRNGSLFSLFTHSRLATNTLVQGFVWFVIGQVYFGISLASDQLGGNIYRDFVLTSLVGIPGNILVIVLTNKYGRKPTLIGSMAVGSFSCIGVSLINPLSELIWLRVTFGMIGQLCLALAFSSMYSWSLELMPTIIRSQAIGLLGVLIRFGGSSAPWVSQWLEHFHYTLPFAVMGSLALVASGLCVRLPETLNVPTIETIDDAKR 593
            DE L  +G+FGR Q+ + L+  L  V  ++  +   F G  P   W           RC  +     N T            R +C            ++T+     DP   +  R       R  W Y    S +IV+E+DLVC       L  +++ +G+  GAF LG+ +D+YGR  + ++S  G+       AF   F ++ +  FL G    G  +T YV+ +E VG K + +  G +  + +TL + +L   ++ +P W+ + +  + P  + L  + ++PES RWL    K  +   +LR I + NG+     + +I +      E  N S   L    ++   TL+  F WF    VY G+ +    +GGN+Y DF ++ +V +PG +L+++   + GR+     S  V   +C+  + +     + WLR T   +G+L + +AF  +Y  + EL PT +R+  + L   L  FGG  AP++   L      LP  + G LA +  GL + LPET  +   ET+DD ++
Sbjct:    5 DEALQRVGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGTQPDHYWCRGPSAAALAERCGWSPEEEWNRTAPASRGPEPPERRGRCQRYLLEAANDSASATSALSCADPLAAFPNRSAPLVPCRGGWRYAQAHS-TIVSEFDLVCVNAWMLDLTQAILNLGFLTGAFTLGYAADRYGRIVIYLLSCLGVGVTGVVVAFAPNFPVFVIFRFLQGVFGKGTWMTCYVIVTEIVGSKQRRIV-GIVIQMFFTLGIIILPGIAYFIPNWQGIQLAITLPSFLFLLYYWVVPESPRWLITRKKGDKALQILRRIAKCNGKYLSSNYSEITVT---DEEVSNPSFLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGIIGGNLYIDFFISGVVELPGALLILLTIERLGRRLPFAASNIVAGVACLVTAFLP--EGIAWLRTTVATLGRLGITMAFEIVYLVNSELYPTTLRNFGVSLCSGLCDFGGIIAPFLLFRLAAVWLELPLIIFGILASICGGLVMLLPETKGIALPETVDDVEK 534          
The following BLAST results are available for this feature:
BLAST of TCONS_00072900-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22A31.291e-5527.56Solute carrier family 22 member 3 OS=Homo sapiens ... [more]
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