TCONS_00072870-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072870-protein
Unique NameTCONS_00072870-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length449

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072870-protein ID=TCONS_00072870-protein|Name=TCONS_00072870-protein|organism=Clytia hemisphaerica|type=polypeptide|length=449bp
MNNQHIIRRLSATARQCQQQVKFTTGKRMYAAAAPVAKVANKPDDVSMKP
LYLDAQATTPLDPRVLDAMLPFSISQYGNPHSRTHFYGWEAEDAVENARE
QVARLIGADAKEIIFTSGATESNNIAVKGVARFNRRKKKHVITTQTEHKC
VLDSCRYLEGDGFDVTYLPVQSNGIIDLKLFEESLRPDTSLVSIMFVNNE
IGVRQPMEEIGRICRERKIYLHTDAAQAVGKIPVDVNSMNIDLMSISGHK
IYGPKGIGALYVRRRPRVRVEPQMSGGGQERGLRSGTLPAPLIVGLGKSC
EIAAQEMDYDKRHVDRLSARLINGIMGQVDHVVRNGDPKMSYPGCVNLSF
SCIEGESLLMALKDIALSSGSACTSASLEPSYVLRALGADDEMAHSSIRF
GIGRFTTEAEVDYTIEKLVQNVNRLREMSPLWEMIQEGIDLKSIEWTQH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045221XLOC_045221Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072870TCONS_00072870Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016454Cysteine_dSase
IPR015422PyrdxlP-dep_Trfase_sub2
IPR000192Aminotrans_V_dom
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR010240Cys_deSase_IscS
IPR020578Aminotrans_V_PyrdxlP_BS
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
GO:0031071cysteine desulfurase activity
Vocabulary: Biological Process
TermDefinition
GO:0044571[2Fe-2S] cluster assembly
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044571 [2Fe-2S] cluster assembly
molecular_function GO:0003824 catalytic activity
molecular_function GO:0031071 cysteine desulfurase activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016454Cysteine desulfurasePIRSFPIRSF005572NifScoord: 48..429
e-value: 1.1E-130
score: 434.1
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 276..449
e-value: 6.7E-49
score: 165.4
IPR000192Aminotransferase class V domainPFAMPF00266Aminotran_5coord: 52..413
e-value: 2.7E-89
score: 299.6
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 25..275
e-value: 5.7E-52
score: 176.1
IPR010240Cysteine desulfurase IscSTIGRFAMTIGR02006TIGR02006coord: 49..449
e-value: 2.1E-199
score: 660.5
IPR010240Cysteine desulfurase IscSHAMAPMF_00331Cys_desulf_IscScoord: 47..440
score: 52.587
IPR020578Aminotransferase class-V, pyridoxal-phosphate binding sitePROSITEPS00595AA_TRANSFER_CLASS_5coord: 241..260
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 49..436

Blast
[Close]
BLAST of TCONS_00072870-protein vs. Swiss-Prot (Human)
Match: NFS1 (Cysteine desulfurase, mitochondrial OS=Homo sapiens GN=NFS1 PE=1 SV=3)

HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0
Identity = 310/429 (72.26%), Postives = 362/429 (84.38%), Query Frame = 0 
Query:   21 VKFTTGKRMYAAAAPVAKVANKPDDVSMKPLYLDAQATTPLDPRVLDAMLPFSISQYGNPHSRTHFYGWEAEDAVENAREQVARLIGADAKEIIFTSGATESNNIAVKGVARFNRRKKKHVITTQTEHKCVLDSCRYLEGDGFDVTYLPVQSNGIIDLKLFEESLRPDTSLVSIMFVNNEIGVRQPMEEIGRICRERKIYLHTDAAQAVGKIPVDVNSMNIDLMSISGHKIYGPKGIGALYVRRRPRVRVEPQMSGGGQERGLRSGTLPAPLIVGLGKSCEIAAQEMDYDKRHVDRLSARLINGIMGQVDHVVRNGDPKMSYPGCVNLSFSCIEGESLLMALKDIALSSGSACTSASLEPSYVLRALGADDEMAHSSIRFGIGRFTTEAEVDYTIEKLVQNVNRLREMSPLWEMIQEGIDLKSIEWTQH 449
            ++   G R   +A P    A       ++PLY+D QATTPLDPRVLDAMLP+ I+ YGNPHSRTH YGWE+E A+E AR+QVA LIGAD +EIIFTSGATESNNIA+KGVARF R +KKH+ITTQTEHKCVLDSCR LE +GF VTYLPVQ +GIIDLK  E +++PDTSLVS+M VNNEIGV+QP+ EIGRIC  RK+Y HTDAAQAVGKIP+DVN M IDLMSISGHKIYGPKG+GA+Y+RRRPRVRVE   SGGGQERG+RSGT+P PL+VGLG +CE+A QEM+YD + + +LS RLI  IM  +  VV NGDPK  YPGC+NLSF+ +EGESLLMALKD+ALSSGSACTSASLEPSYVLRA+G D+++AHSSIRFGIGRFTTE EVDYT+EK +Q+V RLREMSPLWEM+Q+GIDLKSI+WTQH
Sbjct:   29 LRLRVGDRAPQSAVPADTAAAPEVGPVLRPLYMDVQATTPLDPRVLDAMLPYLINYYGNPHSRTHAYGWESEAAMERARQQVASLIGADPREIIFTSGATESNNIAIKGVARFYRSRKKHLITTQTEHKCVLDSCRSLEAEGFQVTYLPVQKSGIIDLKELEAAIQPDTSLVSVMTVNNEIGVKQPIAEIGRICSSRKVYFHTDAAQAVGKIPLDVNDMKIDLMSISGHKIYGPKGVGAIYIRRRPRVRVEALQSGGGQERGMRSGTVPTPLVVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMNGDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTTEEEVDYTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 457
The following BLAST results are available for this feature:
BLAST of TCONS_00072870-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NFS10.000e+072.26Cysteine desulfurase, mitochondrial OS=Homo sapien... [more]
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