TCONS_00072858-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00072858-protein
Unique Name	TCONS_00072858-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	702

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00072858-protein ID=TCONS_00072858-protein|Name=TCONS_00072858-protein|organism=Clytia hemisphaerica|type=polypeptide|length=702bp
MSEGNIHVQSLFIWCMAAIYFFAFSSLYFQIPGLYGRKGLMPAVKELKGQ
CFDSDERCTNWAEVGECKNNQNWMERNCMVSCKVCEKAGELSITQKLSKK
KTLLWFSPALGLDVSSGMELICLYGMALSIAAMISSGFQNKFVFITLWLL
YFSVYQVGQTFLWFQWDILLLETGFLTIFVAQLFNSKSGMNGGHTAMAFW
LVKWLLFRLMFQSGVVKLQSDCPTWWGLTALNWHYESQCIPAPLAWYAHQ
LPEWFQKLSVVATYVIEIALPFLFFLPIRSLRIWGFFSQILLQVLIIMTG
NYTFFNLLTMTLCLSLIDDRFLFEYTPSFVGKYFQLPKVTYEKRSIFRRL
SVFLLKTAVTTTLIYWIVKYFNIRFAADSSQILSDIAFSKEEFKSAVTKL
TRFSIYMGILSHLVHLVRYLGDAAADDRKLKTLIRTFFAAIFATVAGWIF
CISLVPFTQIDRSVQNDIWPVVKEWNNVVDSYELVHSYGLFRSMTGVGGR
PEIIIEGTNDFRNGPWKEYNFKYKPGNLKTPLPVVAPHQPRLDWQMWFAA
LGSYQHNPWFIHLIYKLLEGEKDVLDLVGENPFPDKPPIYIRSRLYTYHY
TTLSKQTTGIIDGVLRSRRIGSWWNRDSPKEYTPPLSVNDESLINYIKSL
GWHKQKLKKEKPNGKLYLFLKAVRKLLKNLDPTFFMFQIILFSLIFKYFY
HL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045219	XLOC_045219	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00072858	TCONS_00072858	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003582	ShKT_dom
IPR009613	LMF

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003582	ShKT domain	SMART	SM00254	ShkT_1	coord: 50..86 e-value: 9.8E-6 score: 35.1
IPR003582	ShKT domain	PFAM	PF01549	ShK	coord: 50..85 e-value: 1.6E-5 score: 25.3
IPR003582	ShKT domain	PROSITE	PS51670	SHKT	coord: 51..85 score: 9.155
IPR009613	Lipase maturation factor	PFAM	PF06762	LMF1	coord: 162..637 e-value: 6.7E-160 score: 532.9

Blast

[Close]

BLAST of TCONS_00072858-protein vs. Swiss-Prot (Human)
Match: LMF2 (Lipase maturation factor 2 OS=Homo sapiens GN=LMF2 PE=1 SV=2)

HSP 1 Score: 442.58 bits (1137), Expect = 3.257e-146
Identity = 277/707 (39.18%), Postives = 388/707 (54.88%), Query Frame = 0

Query:    4 GNIHVQSLFIWCMAAIYFFAFSSLYFQIPGLYGRKGLMPAVKELKGQCFDSDERCTNWAEVGECKNNQNWMERNCMVSCKVCEKAGELSITQKLSKKKTLLWFSPALGLDVSSGMELICLYGMALSIAAMISSGFQNKFVFITLWLLYFSVYQVGQTFLWFQWDILLLETGFLTIFVAQLF------NSKSGMNGG---HTAMAFWLVKWLLFRLMFQSGVVKLQSDCPTWWGLTALNWHYESQCIPAPLAWYAHQLPEWFQKLSVVATYVIEIALPFLFFLPIRSLRIWGFFSQILLQVLIIMTGNYTFFNLLTMTLCLSLIDDRFLFEYTPSFVGKYFQL--PKVTYEKRSIFRRLSVFLLKTAVTTTLIYWIVKYFNIRFAADSSQILSDIAFSKEEFKSAVTKLTRFSIYMGILSHLVHLVRYL---GDAAADDRKLKTLIRTFFAAIFATVAGWIFCISLVPFTQIDRSVQNDIWPVVKEWNNVVDSYELVHSYGLFRSMTGVGGRPEIIIEGTNDFRNGPWKEYNFKYKPGNLKTPLPVVAPHQPRLDWQMWFAALGSYQHNPWFIHLIYKLLEGEKDVLDLVGEN----PFPDKPPIYIRSRLYTYHYTTLSKQTTGIIDGVLRSRRIGSWWNRDSPKEYTPPLSVNDESLINYIKSLGWH-KQKLKKEKPNGKLYLFLKAVRKLLKNLDPTFFMFQIIL 691
            G+   + LF+  +AA++ FAF+SLY QIPGLYG +G++PA + L+ Q              G+ +  Q W                         +  TLLW +P LGLD + G+EL+ L G  +++ A++ S  ++  +++ LW  Y S  QVGQ FL+FQWD LLLETGFL + VA L        +  G   G   H  + FWLV+WLLFRLMF SGVVKL S CP WWGLTAL +HYE+QC+P P AW+AH LP W  KLSVVAT++IEIA+P LFF PIR LR+  F+SQ+LLQVLII+TGNY FFNL+T+ L  +L+DD+ L         K      PK      S+   L+V+ L       L Y  V YF +        I S   F+  +F   +  LT  ++++G+ S +  L+  L          RKL  +++       ATVA  +F ISLVP++ ++      +W         V+  +L +SYGLFR MTG+GGRPE+++EG+ D  +  W E  F YKPGNL  P PVV PHQPRLDWQMWFAALG + H+PWF  L+ +LL+G++ V+ LV       PF  +PP Y+R++ Y Y ++   +Q              G WW R   +E+ P +S+ D +L   ++  G   K   +    N  L   L   R  L  L+    ++ +++
Sbjct:    3 GSRLPRQLFLQGVAAVFMFAFASLYTQIPGLYGPEGILPARRTLRPQ--------------GKGRWQQLW-------------------------ETPTLLWEAPRLGLDTAQGLELLSLLGALVALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQWDSLLLETGFLAVLVAPLRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLIIITGNYNFFNLMTLVLTTALLDDQHLAAEPGHGSRKKTATSWPKALLATLSLLLELAVYGL-------LAYGTVHYFGLEVDWQQRTIHSRTTFTFHQFSQWLKTLTLPTVWLGVASLVWELLSALWRWTQVRGWLRKLSAVVQLSLVGT-ATVA--LFLISLVPYSYVEPGTHGRLWTGAHRLFGAVEHLQLANSYGLFRRMTGLGGRPEVVLEGSYDGHH--WTEIEFMYKPGNLSRPPPVVVPHQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVARYPFHKQPPTYVRAQRYKYWFSQPGEQ--------------GQWWRRQWVEEFFPSVSLGDPTLETLLRQFGLQEKSPPRTRSANSTLAQALHWTRSQLSPLEAPALLWGLLM 644

The following BLAST results are available for this feature:

BLAST of TCONS_00072858-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00072858-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LMF2	3.257e-146	39.18	Lipase maturation factor 2 OS=Homo sapiens GN=LMF2...	[more]

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TCONS_00072858-protein (polypeptide) - C. hemisphaerica