TCONS_00072791-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072791-protein
Unique NameTCONS_00072791-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length427

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072791-protein ID=TCONS_00072791-protein|Name=TCONS_00072791-protein|organism=Clytia hemisphaerica|type=polypeptide|length=427bp
MPLEIKEIEWSETENNVTLKVPLKGANTKTLDIFSSPKYIKVSAPPYYYE
VALHDEIDDDISKATINNGQVLFHLQKVTAGLWGQLHASLHKDKEYMKEL
RAQSLEQKQAKEQEKEKERAAMREQQKKYAVREQMRVDNEERKMREEQKR
KEMEQISRDMEQWKNNETGSETKPSEEKKAPNETERTHVDDEKLIEKKNE
KNKQPTPKSSPRINTQMPLPGTTVNASSKDGKDIKSLPAPRQSGSIQVDF
TPRKLATPARESKLPEEELWLKKVSEMNKMRKVENAEDVVDMEEMNPVWL
KDKGNGFFQQGNFVAAINAYTSALVLDSSIPMLYANRAACHLSLKQHREC
IQDCTNALELYDPPVQDNAMSRCRALTRRGTAYYQLHQYVDALRDYDAAI
KLDPKNQALRTDAFKIRRTLQGGESSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045184XLOC_045184Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072791TCONS_00072791Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR008978HSP20-like_chaperone
IPR001440TPR_1
IPR011990TPR-like_helical_dom
IPR007052CS_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..128
NoneNo IPR availableCOILSCoilCoilcoord: 130..166
NoneNo IPR availableGENE3D1.10.150.160coord: 296..342
e-value: 1.1E-12
score: 47.3
NoneNo IPR availableGENE3D1.20.58.280coord: 343..360
e-value: 0.12
score: 12.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..245
NoneNo IPR availableCDDcd06469p23_DYX1C1_likecoord: 10..87
e-value: 6.71043E-27
score: 101.579
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 373..406
e-value: 2.8E-7
score: 40.2
coord: 297..330
e-value: 0.35
score: 19.9
coord: 331..364
e-value: 0.027
score: 23.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 297..330
score: 6.402
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 373..406
score: 11.594
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 3..97
e-value: 3.2E-15
score: 55.7
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 8..97
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 374..406
e-value: 1.2E-8
score: 34.3
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 361..422
e-value: 5.0E-9
score: 35.7
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 289..410
IPR007052CS domainPFAMPF04969CScoord: 7..77
e-value: 2.6E-7
score: 31.5
IPR007052CS domainPROSITEPS51203CScoord: 3..87
score: 13.554
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 297..406
score: 14.953

Blast
[Close]
BLAST of TCONS_00072791-protein vs. Swiss-Prot (Human)
Match: DAAF4 (Dynein assembly factor 4, axonemal OS=Homo sapiens GN=DNAAF4 PE=1 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 1.370e-91
Identity = 172/426 (40.38%), Postives = 256/426 (60.09%), Query Frame = 0 
Query:    1 MPLEIKEIEWSETENNVTLKVPLKGANTKTLDIFSSPKYIKVSAPPYYYEVALHDEIDDDISKATINNGQVLFHLQKVTAGLWGQLHASLHKDKEYMKELRAQSLEQKQAKEQEKEKERAAMREQQKKYAVREQMRVDNEERKMREEQKRKEMEQISRDMEQWKNNETGSETKPSEEKKAPNETERTHVDDEKLIEKKNEKNKQPTPKSSPRINTQMPLPGTTVNASSKDGKDIKSLPAPRQSGSIQVDFTPRKLATPARESKLPEEELWLKKVSEMNKMRKVENAEDVVDM--EEMNPVWLKDKGNGFFQQGNFVAAINAYTSALVLDSSIPMLYANRAACHLSLKQHRECIQDCTNALELYDPPVQDNAMSRCRALTRRGTAYYQLHQYVDALRDYDAAIKLDPKNQALRTDAFKIRRTLQGGE 424
            MPL++ +  W +T+  V L +PLKG   +  D+F +  Y+KV+ PP+ +E  L+  IDD+ SKA I N  ++F L K  A +W  L  +   DKE M+ +R +S+ Q Q + +E  + +AA + + +KYA+   M+++ EERK  E+ K  E  + ++ +E WK  +  +E    E+KK   E +    + +   E+K  K K  T   + R     P    + N  ++  K+  S+PAPR  GSI+++FTPR   T  RES++ EEE WL K +E  +    + AE + D+  EE NP WLKDKGN  F   N++AAINAY  A+ L++ +P+LY NRAACHL LK   + I+D + ALEL  PPV DNA +R +A  RRGTA+ QL  YV+ L+DY+AA+K+DP N+ ++ DA KIR  +QG E
Sbjct:    1 MPLQVSDYSWQQTKTAVFLSLPLKGVCVRDTDVFCTENYLKVNFPPFLFEAFLYAPIDDESSKAKIGNDTIVFTLYKKEAAMWETLSVT-GVDKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKKIEDMKENERIKATKALEAWKEYQRKAE----EQKKIQREEKLCQKEKQIKEERKKIKYKSLTRNLASR--NLAPKGRNSENIFTEKLKE-DSIPAPRSVGSIKINFTPRVFPTALRESQVAEEEEWLHKQAEARRAMNTDIAE-LCDLKEEEKNPEWLKDKGNKLFATENYLAAINAYNLAIRLNNKMPLLYLNRAACHLKLKNLHKAIEDSSKALELLMPPVTDNANARMKAHVRRGTAFCQLELYVEGLQDYEAALKIDPSNKIVQIDAEKIRNVIQGTE 417
The following BLAST results are available for this feature:
BLAST of TCONS_00072791-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAAF41.370e-9140.38Dynein assembly factor 4, axonemal OS=Homo sapiens... [more]
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