TCONS_00072788-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072788-protein
Unique NameTCONS_00072788-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1215

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072788-protein ID=TCONS_00072788-protein|Name=TCONS_00072788-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1215bp
ITRSLELNKKKSTKIQITVSIMSDSKFEFDEKGNEKALADDDDFFGTEPE
KEKIMSDSELNKDLTNGHVSENDLLEDSPRKDDIPSVSDHEDDKGNDETE
PEKRDLESPDDFIQDSPRKDDMPPVEDSPRKPDKEESPREQEESPRKDDE
SPRKDDESPRKHDESPRKQEESPRKSEDEEDKAEDPPVENNVSEPEDVNE
EPDSARSNKSSEDKLNSARESPVQSARSNGSAKSTRSNLRGDSAKSNGRA
ESAKSNGRAESSRSNRVESSRSNRVSDSARSTRSNRAESSHSNRQPVDND
SPRSSAPESDDDFFEDKKDDLPGRKSTARSTRSNRHSDTEAPAQNGEADR
QYDDSEEEEEEDLNKRYMSDTEGEKSPRNSDRNSGRDSDRRSRNSRQDSD
NNDGPRENGNENYSDDDFSDGDGSDRDSPRPSGSDGGYSDESDENDSEEE
RKRKEEENRKKKEKQKKAKKPPLPRQQLVKSSGYGGKKKGKARVKSVDKI
NAGGNGQFNDDRSVLVNRVLSANRNKAKALHNVIFELQQHIETLTQENKD
LKKAARMQDRELKKLDNAEAELPSLIKKHHEEVRVLQQKFRKQKEAAEKS
RESLKKREDELTKTQDKLRKYQKMVKDKGLIEKNNLNKRVEQLEQQVEEK
NNKIAELSRSVQLHEKIRSRELRDKNEKYKKAIDEMKRLEKEHRELQAKL
KEKEKALESTNLYAHKIQLRKHSKDESLFSENSPVPAPLKRQQQERQRQD
QKKKAFLTDNASVDNEPQKSPRSKYDSPRSIKHDSPRSNFDSPRGHRDEV
QTAVSQHNDDFYEKKSEDQERLEEVDRKLAEMRRKDEEDRLERERKLAEA
ERELDEKLRQKEQERIDLEREIAERKERERREAEEEERRREDEQRRQEEL
RRQKAEGEKRRQEQDEEEDRIFLEKKRKKELLLARMQAIDKGENPDNINE
SSPSFKRKEKPKKKPIFLQNDSEKENANKSSKDDDNDDFLSHKPFDFSDK
GKDNQTKPAPRRRGTNDSLKSNENLSRNNSGRKNSWEFTQRDENLHRGLP
ANDSPAVHRRSNLVDDSFDDNHSNNSSASKKGRRGEPINGFESTYSPTVL
DNSPRSNNNNNNNNNNRNNRRNQQKSLFDEFEDPFKESTKKPTTTAKKTT
ILSDGEDDIDDFLNDDYNPSSTTKKQPHPPKTQPIRSRPNSGRHNVGRLS
AAATPDIDDVEEISL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045182XLOC_045182Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072788TCONS_00072788Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028933Lebercilin_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 626..667
NoneNo IPR availableCOILSCoilCoilcoord: 438..467
NoneNo IPR availableCOILSCoilCoilcoord: 669..713
NoneNo IPR availableCOILSCoilCoilcoord: 576..624
NoneNo IPR availableCOILSCoilCoilcoord: 534..571
NoneNo IPR availableCOILSCoilCoilcoord: 815..917
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 718..1215
IPR028933Lebercilin domainPFAMPF15619Lebercilincoord: 517..707
e-value: 8.1E-43
score: 146.2

Blast
[Close]
BLAST of TCONS_00072788-protein vs. Swiss-Prot (Human)
Match: LCA5L (Lebercilin-like protein OS=Homo sapiens GN=LCA5L PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.512e-22
Identity = 72/236 (30.51%), Postives = 127/236 (53.81%), Query Frame = 0 
Query:  489 KGKARVKSVDKINAGGNGQFNDD-------RSVLVNRVLSANRNKAKALHNVIFELQQHIETLTQENKDLKKAARMQDRELKKLDNAEAELPSLIKKHHEEVRVLQQKFRKQKEAAEKSRESLKKREDELTKTQDKLRKYQKMVKDKGLIEKNNLNKRVEQLEQQVEEKNNKIAELSRSVQLHEKIRSRELRDKNEKYKKAIDEMKRLEKEHRELQAKLKEKEKALESTNLYAHKI 717
            KG+  + SV+K +      FN         R  + +R+LSA  +K K L N + ++   +E +  EN+ LK+      + + K +N++  LP ++ KH  EV+ L+Q  RK +E        L++ + +L KT+D L+  QK+ +DK L E+  L  ++  +  +++  + KI  L + ++L+ +  SR+L  +  K   A    K L+ E + LQ KLKEK++ LE  N+Y+H+I
Sbjct:  107 KGQKEI-SVEKKHTWNASLFNSQIHMIAQRRDAMAHRILSARLHKIKGLKNELADMHHKLEAILTENQFLKQLQLRHLKAIGKYENSQNNLPQIMAKHQNEVKNLRQLLRKSQEKERTLSRKLRETDSQLLKTKDILQALQKLSEDKNLAEREELTHKLSIITTKMDANDKKIQSLEKQLRLNCRAFSRQLAIETRKTLAAQTATKTLQVEVKHLQQKLKEKDRELEIKNIYSHRI 341
The following BLAST results are available for this feature:
BLAST of TCONS_00072788-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LCA5L2.512e-2230.51Lebercilin-like protein OS=Homo sapiens GN=LCA5L P... [more]
back to top