TCONS_00072768-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072768-protein
Unique NameTCONS_00072768-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length484

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072768-protein ID=TCONS_00072768-protein|Name=TCONS_00072768-protein|organism=Clytia hemisphaerica|type=polypeptide|length=484bp
MAARFSVYALIVLRVLEGIALGVLFPSNHAIWGQWAPPLERSRLFSITAA
GCPVGTILTMPMTGLLTKYGFDGGWASVFYVFGAVGLLWSFVWWLVIHPA
PETHPTISQAEKNYIMASLSNRKGEKAPPVPWLKIITSIPVWATIVANFT
ADWGLYTILICIPKFFQKVLNFDIATTGFLVSLPYLIKAIVGPSGGIIAD
MMIMNGFSVKNTRRLIFTIGCTTASIFIVGVGYAKSKAVAIGLLCTGVGI
TGLNATGYAVNILDIAPRFAGVIIGFSNVFGSMPGFISPMIVGYITTKNT
AAEWQLVFWITAFVYAFGVVFFALTVSGDRQPWNDPEGEGKNSDTXTVSG
DRQPWNDPEGEGKNSDTIESGDEPARSISPDPTSDAKLTDVRKLSSPGTE
DKKTEPTKQSPQADKKSGSSSPKDGSSSPKEDAKNDGASSPKEGSASPKD
GSASPKDGSTSPKDGSTSPKEETSAQPEDETKKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045176XLOC_045176Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072768TCONS_00072768Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..115
e-value: 3.5E-17
score: 61.8
NoneNo IPR availableGENE3D1.20.1250.20coord: 126..335
e-value: 1.8E-25
score: 88.9
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 6..289
e-value: 4.8E-35
score: 121.0
IPR005829Sugar transporter, conserved sitePROSITEPS00217SUGAR_TRANSPORT_2coord: 16..41
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 1..330
score: 19.757
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 1..324
e-value: 1.44597E-34
score: 131.282
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 5..327

Blast
[Close]
BLAST of TCONS_00072768-protein vs. Swiss-Prot (Human)
Match: VGLU2 (Vesicular glutamate transporter 2 OS=Homo sapiens GN=SLC17A6 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 2.822e-89
Identity = 140/341 (41.06%), Postives = 208/341 (61.00%), Query Frame = 0 
Query:    2 AARFSVYALIVLRVLEGIALGVLFPSNHAIWGQWAPPLERSRLFSITAAGCPVGTILTMPMTGLLTKYGFDGGWASVFYVFGAVGLLWSFVWWLVIHPAPETHPTISQAEKNYIMASL---SNRKGEKAP-PVPWLKIITSIPVWATIVANFTADWGLYTILICIPKFFQKVLNFDIATTGFLVSLPYLIKAIVGPSGGIIADMMIMNG-FSVKNTRRLIFTIGCTTASIFIVGVGYAKSKAVAIGLLCTGVGITGLNATGYAVNILDIAPRFAGVIIGFSNVFGSMPGFISPMIVGYITTKNTAAEWQLVFWITAFVYAFGVVFFALTVSGDRQPWNDPE 337
            AAR     +I +R+L+G+  GV +P+ H IW +WAPPLERSRL + +  G   G ++ MP+ G+L +Y    GW+SVFYV+G+ G++W   W LV + +P  HPTI+  E+ YI  S+   +N  G       PW K  TS+PV+A IVANF   W  Y +LI  P +F++V  F+I+  G L ++P+L+  I+ P GG IAD +      S    R+++   G    +  ++ VGY+ ++ VAI  L   VG +G   +G+ VN LDIAPR+A +++G SN  G++ G + P+IVG +T   +  EWQ VF I A V+  GV+F+A+  SG++QPW DPE
Sbjct:  172 AARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYT---GWSSVFYVYGSFGMVWYMFWLLVSYESPAKHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEWQYVFLIAALVHYGGVIFYAIFASGEKQPWADPE 509
The following BLAST results are available for this feature:
BLAST of TCONS_00072768-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VGLU22.822e-8941.06Vesicular glutamate transporter 2 OS=Homo sapiens ... [more]
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