TCONS_00072751-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00072751-protein
Unique Name	TCONS_00072751-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	521

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00072751-protein ID=TCONS_00072751-protein|Name=TCONS_00072751-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
LINNMGSVAETTFLSPVDGINTKTTLESPPLAIANNSLSSQKDQPPEENT
LRREMKFRHAFSFVVGCMVGAGIFVTPSLIAQRTPNLFVSLLAWIVAGLV
ALIGALCYCEMASIVKKTGSSYVFILDCYGPAAGFLVNWANVFLFAPCDA
CILLLTIGLYACAPFYEDHTSPEYQWMSKLVGIVIMLCISVIHCLGAKKS
GIFQMVFMAIQMLVFATIVGLGIYSLSARNTYHHFETNIVFNNTLNGLSD
EFPSFGIALFNALYCFDGYVTIAFIVEEVINPSKAVPLLSFTSIPFVTFL
YILINLACAAVLTHKEIATSNVFLSDVAFKIGGESLSYVVPFAVSICVIP
ALSAVFYNLPRLMMSAAREGQFPRFFALIHRERRTPIPSVIFLAIVSTVL
TLLNLELQSMLQICNIVIWFEYAFAVSTILVNRWRKPNMKRAYKTWLITP
IIMIVIPLILLILAIMEKSFITILILVLMMLGLPVYFVCLKKRWISSRLN
QFVYRILVNNTNLVECKINCE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045161	XLOC_045161	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00072751	TCONS_00072751	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1

Vocabulary: **Molecular Function**
Term	Definition
GO:0015171	amino acid transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0003333	amino acid transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0015171	amino acid transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002293	Amino acid/polyamine transporter I	PFAM	PF13520	AA_permease_2	coord: 57..466 e-value: 2.8E-51 score: 174.6
IPR002293	Amino acid/polyamine transporter I	PIRSF	PIRSF006060	AA_transporter	coord: 34..505 e-value: 1.4E-71 score: 238.9

Blast

[Close]

BLAST of TCONS_00072751-protein vs. Swiss-Prot (Human)
Match: BAT1 (b(0,+)-type amino acid transporter 1 OS=Homo sapiens GN=SLC7A9 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 8.857e-64
Identity = 131/454 (28.85%), Postives = 235/454 (51.76%), Query Frame = 0

Query:   39 SSQKDQPPEENTLRREMKFRHAFSFVVGCMVGAGIFVTPSLIAQRTPNLFVSLLAWIVAGLVALIGALCYCEMASIVKKTGSSYVFILDCYGPAAGFLVNWANVFLFAPCDACILLLTIGLYACAPFYEDHTSPEYQWMSKLVGIVIMLCISVIHCLGAKKSGIFQMVFMAIQMLVFATIVGLGIYSLSARNTYHHFETNIVFNNTLNGLSDEFPSFGIALFNALYCFDGYVTIAFIVEEVINPSKAVPLLSFTSIPFVTFLYILINLACAAVLTHKEIATSNVFLSDVAFKIGGESL---SYVVPFAVSICVIPALSAVFYNLPRLMMSAAREGQFPRFFALIHRERRTPIPSVIFLAIVSTVLTLLNLELQSMLQICNIVIWFEYAFAVSTILVNRWRKPNMKRAYKTWLITPIIMIVIPLILLILAIMEKSFITILILVLMML-GLPVYFV 488
             S + Q P+  +L++E+      S +VG ++G+GIFV+P  +   T  +   L+ W   G++A +GALC+ E+ +++ K+G  Y ++++ YGP   +L +WA++ +  P    I+ L+   Y CAPFY     P  Q + K +    +L IS ++ L  +     Q +F A ++++ A I+  G+  L+  NT +       F+N+  G      +  +A +N L+ +DG+  + +I EE+ NP + +PL     IP VT  YIL+N++   V+T  E+  S      VA   G   L   S++VP  V+   I A +   +   RL+  A REG   +  + I   R TP P++IF  I++T+  +   ++ S++   +   W  Y   +  ++V R+ +  ++R  K  ++ P++M +I + L++  I+ K     L  VL +L GL  YF+
Sbjct:   14 KSIQSQEPKTTSLQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPP--QIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVAIIIISGLVLLAQGNTKN-------FDNSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYILMNVSYFTVMTATELLQSQA----VAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSYISVRRLTPAPAIIFYGIIATIYIIPG-DINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVLMTLISVFLVLAPIISKPTWEYLYCVLFILSGLLFYFL 453

The following BLAST results are available for this feature:

BLAST of TCONS_00072751-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00072751-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BAT1	8.857e-64	28.85	b(0,+)-type amino acid transporter 1 OS=Homo sapie...	[more]

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TCONS_00072751-protein (polypeptide) - C. hemisphaerica