TCONS_00072701-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072701-protein
Unique NameTCONS_00072701-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072701-protein ID=TCONS_00072701-protein|Name=TCONS_00072701-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MGNEKKQKFTEGEKVLCYHGPLLYEAKIHKLKTKDRVTKFLVHYAGWNTK
WDEWVADSRVMKYNDEGLKKQKELKQHHSSSRKGKKKDSKDDKPDTPVPS
KRRKGRHANQNDSEPSYVQKMEVKIIIPQDLRRFLLDDCDFVTRQKQLVP
LPKPEELTLKAVTDRFFKTKEEGGEDGKLSGSFSEVCRGICEYFDVMLGS
QLLYKFERTQYGDILKEHPGKPLCEIYGCEHLLRLFVKMGTFLSYSCLDE
PSMEFVVSHIHDFLEFMTKQADDLFCAEYENSTPDYQRRTNV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045126XLOC_045126Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072701TCONS_00072701Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR026541MRG_dom
IPR008676MRG
IPR025995Tudor-knot
IPR016197Chromodomain-like
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006325chromatin organization
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006325 chromatin organization
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 8..76
e-value: 1.2E-6
score: 38.1
IPR026541MRG domainPFAMPF05712MRGcoord: 110..280
e-value: 7.7E-41
score: 139.5
IPR026541MRG domainPROSITEPS51640MRGcoord: 119..291
score: 50.461
NoneNo IPR availableGENE3D2.30.30.140coord: 2..46
e-value: 1.4E-19
score: 69.5
NoneNo IPR availableGENE3D2.30.30.140coord: 47..84
e-value: 1.2E-15
score: 57.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..116
NoneNo IPR availableCDDcd00024CHROMOcoord: 13..77
e-value: 2.22508E-4
score: 37.2435
IPR008676MRGPIRSFPIRSF038133EAF3_MRG15coord: 2..292
e-value: 6.8E-86
score: 285.8
IPR025995RNA binding activity-knot of a chromodomainPFAMPF11717Tudor-knotcoord: 10..60
e-value: 1.8E-12
score: 46.9
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 5..144

Blast
[Close]
BLAST of TCONS_00072701-protein vs. Swiss-Prot (Human)
Match: MO4L1 (Mortality factor 4-like protein 1 OS=Homo sapiens GN=MORF4L1 PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.341e-77
Identity = 130/356 (36.52%), Postives = 198/356 (55.62%), Query Frame = 0 
Query:    6 KQKFTEGEKVLCYHGPLLYEAKIHKLKTKDRVTKFLVHYAGWNTK---------------------------------------WDEWVADSRVMKYNDEGLKKQKELK-----QHHSSSRKG-----------------KKKDSKDDKP---------DTPVPSKRRKGRHANQNDSEPSYVQKMEVKIIIPQDLRRFLLDDCDFVTRQKQLVPLPKPEELTLKAVTDRFFKTKEEGGEDGKLSGSFSEVCRGICEYFDVMLGSQLLYKFERTQYGDILKEHPGKPLCEIYGCEHLLRLFVKMGTFLSYSCLDEPSMEFVVSHIHDFLEFMTKQADDLFCA-EYENSTPDYQRRT 290
            K KF EGE+VLC+HGPLLYEAK  K+  KD+  K+ +HY+GWN K                                       WDEWV +SRV+KY D  L+KQ+EL+     Q+     +G                 K K +K   P         +TP P ++++ R     ++E +++ ++EVK+ IP++L+ +L+DD D +TRQKQL  LP  +   + ++ + +   K+  G       + +EV  GI EYF+VMLG+QLLYKFER QY +IL +HP  P+ ++YG  HLLRLFV++G  L+Y+ LDE S+  +++++HDFL+++ K +  LF A +YE + P+Y R+ 
Sbjct:    8 KPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKKSAVRPRRSEKSLKTHEDIVALFPVPEGAPSVHHPLLTSSWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKK--NVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRKA 361
The following BLAST results are available for this feature:
BLAST of TCONS_00072701-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MO4L11.341e-7736.52Mortality factor 4-like protein 1 OS=Homo sapiens ... [more]
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