TCONS_00072691-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072691-protein
Unique NameTCONS_00072691-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length354

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072691-protein ID=TCONS_00072691-protein|Name=TCONS_00072691-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
MIKDIIKAAMKVYSVKGLYVDNLEAEVESTWTFSGGLFFTATLVTTIGYG
DRYPLTTGGRWFTIVYALFGIPLTGVILTKIGFRLTKLVKKMDNLLTKPI
KKTLGVLAAESENRIKFYVRIIQLLIVVALFLLLFWIIPAIIMVEIEEEW
DLITAIYFCFITITTVGLGDITPGTSDVSVELGDEAFSASNMKAAALQVS
TLLYFLLGLSALTIILGLVTSMLHHLADQAKSKAEQGMNMLGNVRQSVMD
KTRRLTGAPPSPQKKSVTEKSPELASVPEEHETDGIDQAPELSMDALLAT
ESEASESLFNLGYDDDETKSDKAGSPVKVNQKHKERTDSKTSLIGQENHL
PNIV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045120XLOC_045120Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072691TCONS_00072691Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0032802pore_dom_K_chnl
IPR013099K_chnl_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005267potassium channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0071805potassium ion transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071805 potassium ion transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005267 potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003280Two pore domain potassium channelPRINTSPR013332POREKCHANELcoord: 42..70
score: 50.93
coord: 164..173
score: 56.32
NoneNo IPR availableGENE3D1.10.287.70coord: 11..95
e-value: 1.6E-19
score: 69.0
NoneNo IPR availableGENE3D1.10.287.70coord: 119..230
e-value: 1.8E-18
score: 65.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..354
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 15..95
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 117..239
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 132..223
e-value: 1.3E-15
score: 57.0
coord: 20..86
e-value: 1.0E-16
score: 60.5

Blast
[Close]
BLAST of TCONS_00072691-protein vs. Swiss-Prot (Human)
Match: KCNK6 (Potassium channel subfamily K member 6 OS=Homo sapiens GN=KCNK6 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.392e-25
Identity = 63/189 (33.33%), Postives = 94/189 (49.74%), Query Frame = 0 
Query:   28 ESTWTFSGGLFFTATLVTTIGYGDRYPLTTGGRWFTIVYALFGIPLTGVILTKIGFRLTKLVKKMDNLLTKPIKKTLGVLAAESENRIKFYVRIIQLLIVVALFLLLFWIIPAIIMVEIEEEWDLITAIYFCFITITTVGLGDITPGTSDVSVELGDEAFSASNMKAAALQVSTLLYFLLGLSALTIIL 216
            +  W F+  LFF +TL+TT+GYG   PLT  G+ F+I +AL G+P T ++LT    RL+        LLT      L +       R   +  +  L +VV +  L    +PA+I   +EE W  + A YFCFI+++T+GLGD  PG +                  A  +V   +Y  LGL A+ ++L
Sbjct:   88 DPAWDFASALFFASTLITTVGYGYTTPLTDAGKAFSIAFALLGVPTTMLLLTASAQRLSL-------LLTHVPLSWLSMRWGWDPRRAACWHLVALLGVVVTVCFL----VPAVIFAHLEEAWSFLDAFYFCFISLSTIGLGDYVPGEAP------------GQPYRALYKVLVTVYLFLGLVAMVLVL 253
The following BLAST results are available for this feature:
BLAST of TCONS_00072691-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNK61.392e-2533.33Potassium channel subfamily K member 6 OS=Homo sap... [more]
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