TCONS_00072637-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072637-protein
Unique NameTCONS_00072637-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length758

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072637-protein ID=TCONS_00072637-protein|Name=TCONS_00072637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=758bp
MAMQKCHIIKDPHNKQITSICYNPLKHEIAAGLEDGTIKTWDCVGENIGK
LTKTCHEHDGWVNCLLYWPDAKLLLSAANDGKLIAWGSSMLPMSVSKIGT
PIYCMAWNIRRSQIILGVNSALKVYTLKDPSKDGKMLSDKPFVARDHTDL
VKGVVCHETRVYSVGFDRKFCIYDSYAYPDKAGLKLVSCLYPAHESGITT
LSMAKDNENNTWLLTGSFDKTVKVWSQDGQVMHKFDGLGTTVTGVCFVPP
VRTIWIAAGTSDVPMFDPKSGDNVSEFSGTFHYKDPSETNNSVLQILLFI
QDLNQVIATDCRKQICIWKYNPTGCITALRHKYAVEALTYTKKIPMLIFS
GDSFGQIMKWERLQSNHFMYSKECLSRTEALALLTSQIAEQYEWASTDKR
QLREQIDYKPNTNPNAEANVALLKLLFVEELDLLIGASEDNNIYVWGFDY
DAVGVLQQMKPKDDILSHKFAFLLRHSHIESQNIDESNPSKVQEVVTDSV
TDRVAGFICKAAFTNHKQCVSGLAVVPKDDERNNTYLISAGWDRRIFIWN
LDTLCLHDVFRHPDSKGNHDNEMAADGIIVDLVYCQERDEFAYCSADKLV
YIRAFSEDGSQMKLKAVLQGHEAEVTQVRWNSIHQKWVTGSDDCTIRVWS
ADGMNCELVLSTSGGITAMCIDQTNGCVVVGIQEIIRVYDIKSRSLVQSN
IGHRDCIRSLIHIPERQQYVSASWDKTVRAWNAFKGHKKKPEEEDNKEDE
EESYENGS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045087XLOC_045087Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072637TCONS_00072637Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 637..651
score: 31.91
coord: 29..43
score: 32.15
coord: 213..227
score: 40.32
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 401..447
e-value: 480.0
score: 0.1
coord: 506..550
e-value: 0.022
score: 23.9
coord: 653..690
e-value: 15.0
score: 9.6
coord: 3..42
e-value: 9.7E-4
score: 28.4
coord: 693..732
e-value: 0.004
score: 26.4
coord: 611..650
e-value: 4.8E-8
score: 42.7
coord: 322..361
e-value: 120.0
score: 3.9
coord: 183..226
e-value: 8.1E-5
score: 32.0
coord: 48..87
e-value: 3.1E-4
score: 30.1
coord: 137..174
e-value: 24.0
score: 8.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 12..42
e-value: 0.037
score: 14.8
coord: 696..732
e-value: 0.16
score: 12.8
coord: 615..650
e-value: 7.2E-5
score: 23.4
coord: 191..226
e-value: 1.6E-4
score: 22.3
coord: 509..550
e-value: 0.041
score: 14.7
coord: 49..86
e-value: 0.22
score: 12.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 618..650
score: 12.547
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 513..553
score: 8.904
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 191..226
score: 10.776
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 10..42
score: 10.843
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 700..732
score: 9.305
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 55..86
score: 9.038
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 402..587
e-value: 3.1E-11
score: 42.2
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 588..648
e-value: 3.5E-10
score: 38.8
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 94..401
e-value: 1.1E-23
score: 83.2
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 7..93
e-value: 5.9E-15
score: 54.1
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 649..743
e-value: 3.3E-15
score: 55.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 736..758
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 29..43
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 537..551
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 191..235
score: 9.467
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 513..741
score: 15.689
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 10..96
score: 13.633
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 432..451
coord: 505..739
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 10..357

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072637-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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