TCONS_00072616-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00072616-protein
Unique Name	TCONS_00072616-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	504

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00072616-protein ID=TCONS_00072616-protein|Name=TCONS_00072616-protein|organism=Clytia hemisphaerica|type=polypeptide|length=504bp
MAEPLKSFKKDDRHHLIQSKKTKNTRMSAPTRSQRLAAKRAMKASQLANQ
ENVGVPSANLKKVKGRSGKRSVSEMSPAKAPVTRKRTAFGDITNAIHAHA
ERISMGKKKAPVGPSKKTTRPMTRNSSQTKIDLKKPVVGGNAIVRNRFGK
LKEDEVAIHEAVLSSDLISSSNENQNEAMTSFSSETMSMLEGSFNDSLTA
SGKRKPRPVPRIPMEILKDSPVPETSAADTTLPDGVKPYDLDEDPNSVSE
YADSIFRNMKKRELKFAVQNYLIQEGSETTGAMRAILVDWLVEVQENFEL
YHETLYLAVKITDFYLQHNPTPKELLQLVGATALLLSCKIEERSPPPLDD
FQFICDDAYTHKQFVDMELKVLTAIDFELNIPVPYRFLRRFARVTGMSMQ
ILTLSRYLLELSLHESKFVAERPSKVAAACLCLSLKLKKEHSWNVNFSYH
TGYEERELEKLVRDLNKMMTDAPKNKLQTVRTKYSHTIFYEVAKTEPLPA
SELQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045075	XLOC_045075	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00072616	TCONS_00072616	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013763	Cyclin-like
IPR004367	Cyclin_C-dom
IPR006671	Cyclin_N

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 386..467 e-value: 1.6E-17 score: 74.2 coord: 289..373 e-value: 3.5E-23 score: 93.0
IPR013763	Cyclin-like	GENE3D	1.10.472.10		coord: 374..504 e-value: 1.9E-34 score: 118.2
IPR013763	Cyclin-like	GENE3D	1.10.472.10		coord: 268..373 e-value: 1.7E-28 score: 98.3
IPR013763	Cyclin-like	SUPERFAMILY	47954	Cyclin-like	coord: 244..380
IPR013763	Cyclin-like	SUPERFAMILY	47954	Cyclin-like	coord: 381..498
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 382..498 e-value: 8.5E-34 score: 128.3
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 382..497 e-value: 1.5E-27 score: 95.9
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 255..380 e-value: 8.3E-36 score: 122.5
None	No IPR available	PIRSF	PIRSF001771	Cyclin_A_B_D_E	coord: 5..83 e-value: 44.0 score: 0.9 coord: 41..504 e-value: 4.7E-89 score: 297.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..128
None	No IPR available	CDD	cd00043	CYCLIN	coord: 380..465 e-value: 6.22956E-16 score: 72.2712
None	No IPR available	CDD	cd00043	CYCLIN	coord: 283..372 e-value: 4.08057E-21 score: 86.9088

Blast

[Close]

BLAST of TCONS_00072616-protein vs. Swiss-Prot (Human)
Match: CCNB3 (G2/mitotic-specific cyclin-B3 OS=Homo sapiens GN=CCNB3 PE=1 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 6.270e-64
Identity = 137/317 (43.22%), Postives = 193/317 (60.88%), Query Frame = 0

Query:  182 FSSETMSMLEGSFNDSLTASGKRKPRPVPRIPMEILKDSPVPETSAADTTLPDGVKPY-DLDED---PNSVSEYADSIFRNMKKRELKFAVQNYLIQEGSETTGAMRAILVDWLVEVQENFELYHETLYLAVKITDFYLQHNPTPKELLQLVGATALLLSCKIEERSPPPLDDFQFICDDAYTHKQFVDMELKVLTAIDFELNIPVPYRFLRRFARVTGMSMQILTLSRYLLELSLHESKFVAERPSKVAAACLCLSLKLKKEHSWNVNFSYHTGYEERELEKLVRDLNKMMTDAPKNKLQTVRTKYSHTIFYEVAK 494
            FS+   S+ E S   ++T+ GK +         E   D PV   S      P  + P  D+DED   P+    YA  IF  MK+RE +F + +Y+ ++  E T  MRAILVDWLVEVQ +FE+ HETLYLAVK+ D YL      K+ LQL+GATA +++ K EE + P +DDF +ICDD Y   + + ME+ +L  +  ++NIP+ Y FLRR+AR    +M+ LTLSRY+ E++L E  +V E+ SK+AAA L L+L +KK   W     +++GY   EL  LVR LNK++T +  + L+ V  KYSH +F+EVAK
Sbjct: 1060 FSTTPESITEKSSIATMTSVGKSRTT-TESSACESASDKPV---SPQAKGTPKEITPREDIDEDSSDPSFNPMYAKEIFSYMKEREEQFILTDYMNRQI-EITSDMRAILVDWLVEVQVSFEMTHETLYLAVKLVDLYLMKAVCKKDKLQLLGATAFMIAAKFEEHNSPRVDDFVYICDDNYQRSEVLSMEINILNVLKCDINIPIAYHFLRRYARCIHTNMKTLTLSRYICEMTLQEYHYVQEKASKLAAASLLLALYMKKLGYWVPFLEHYSGYSISELHPLVRQLNKLLTFSSYDSLKAVYYKYSHPVFFEVAK 1371

The following BLAST results are available for this feature:

BLAST of TCONS_00072616-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00072616-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CCNB3	6.270e-64	43.22	G2/mitotic-specific cyclin-B3 OS=Homo sapiens GN=C...	[more]

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TCONS_00072616-protein (polypeptide) - C. hemisphaerica