TCONS_00072534-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072534-protein
Unique NameTCONS_00072534-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length119

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072534-protein ID=TCONS_00072534-protein|Name=TCONS_00072534-protein|organism=Clytia hemisphaerica|type=polypeptide|length=119bp
MPEESNLLQEVDLLIKDVQFALNVFKLSDILPQSPNEVYVNIETKETEKF
TIQLTSQGFKVVAHQFDQNDENGSAKYPTPFETINALLEHISASFVELFG
NALKQKLEALQSAQDAENE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045013XLOC_045013Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072534TCONS_00072534Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023231GSKIP_dom
IPR007967DUF727
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..119
IPR023231GSKIP domainGENE3D3.30.2280.10coord: 6..115
e-value: 4.3E-23
score: 80.7
IPR023231GSKIP domainSUPERFAMILY103107Hypothetical protein c14orf129, hspc210coord: 4..112
IPR007967Protein of unknown function DUF727PFAMPF05303DUF727coord: 9..110
e-value: 2.0E-24
score: 85.6
IPR007967Protein of unknown function DUF727PRODOMPD080843coord: 10..100
e-value: 5.0E-12
score: 166.0

Blast
[Close]
BLAST of TCONS_00072534-protein vs. Swiss-Prot (Human)
Match: GSKIP (GSK3-beta interaction protein OS=Homo sapiens GN=GSKIP PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.104e-20
Identity = 42/103 (40.78%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:   10 EVDLLIKDVQFALNVFKLSDILPQSPNEVYVNIETKETEKFTIQLTSQGFKVVAHQFDQNDENGSAKYPTPF-ETINALLEHISASFVELFGNALKQKLEALQ 111
            E + ++ DV FA+N   +S  L  + +  Y+N+ETKE  ++ ++LT  G KVV + FDQ D++      TP+ ET+ +LL+ +S ++ E FGNAL Q+LEAL+
Sbjct:   36 EAEAVVNDVLFAVNNMFVSKSLRCADDVAYINVETKERNRYCLELTEAGLKVVGYAFDQVDDH----LQTPYHETVYSLLDTLSPAYREAFGNALLQRLEALK 134
The following BLAST results are available for this feature:
BLAST of TCONS_00072534-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GSKIP2.104e-2040.78GSK3-beta interaction protein OS=Homo sapiens GN=G... [more]
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