TCONS_00072532-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072532-protein
Unique NameTCONS_00072532-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length538

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072532-protein ID=TCONS_00072532-protein|Name=TCONS_00072532-protein|organism=Clytia hemisphaerica|type=polypeptide|length=538bp
MKEKCYVCGSKPAKQCTGCHLISYCCVSCQKKDWSFHKHSCKSKPHNVVD
FLINANIYDDLVKKIFHYLPGRELHYVRCVKRSWRAIVDSMWHSKVDRNL
FEVKLAHQWTHKHPRGRMLFQGHGMPSQEIKHNSQELFLACRDQNKILVL
DMDNMYKVTYVSRWQTKTKYVINVDNTMYRDLIWDVHKSFVMVWNKTGIK
CWDRITKEEMVICDESKKLQSGIGMTGRYASGGKRKDIPKKINIFGNIVI
IVYLSGLILKFSVKISPVDSEDSHEKIATFHLLHNFENLVDCSPVDIDQI
KISHGTMSNGQYYFGCTRIYSKLYYEGDSGNDSSDDECNEAGLWCLEDDE
FLADLQEVEDIHAVSRVGDDDYCLLSRNHDSTDQHNFNGSDMNALFCPTK
YLELWKNNKSLRSLKVKGLSGAYMNKICIAILCHPGLMQPTSLTCYFIKD
IADPNINFSNLSTVLVTPFDSLPKSLFMTKNQIIWSHERHDKDGCFLCYK
NPCSRDTFAINSMNFWYVPYYADQTVDVPPGHSLPSKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045012XLOC_045012Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072532TCONS_00072532Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 5..41
e-value: 1.0E-7
score: 31.8
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 5..41
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 5..41
score: 11.421
NoneNo IPR availableGENE3D1.20.1280.50coord: 42..212
e-value: 3.7E-5
score: 23.3
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 3..44
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 59..124

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072532-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top