TCONS_00072511-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072511-protein
Unique NameTCONS_00072511-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length949

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072511-protein ID=TCONS_00072511-protein|Name=TCONS_00072511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=949bp
MENLVKALQLAASQNIQEVKAAEEQLKQWETTAGFYPKLLEIFAMRHLEV
NIRWIAIICLKNGIDKYWRRVVKNCLPDDEKNFIKQNIMIFDEVTPELAL
QLSVVIGRIARNDIKIWPQCLEVTIEAIKSTNSINQHRGLLTLKQIVKEL
ASKRLASDRRVFHEISSKIFEFLVELCYSSVGRLQAGSIQEVDLCLLVTK
VLRRLLIYGGKLYDENTPQIRYVKWCVTQVPVFVELRNKNTEKRPKLHKY
VLLLMKILTEFEEHQSGSMLPILHDMLQLCLHYILSNRNDCQEDSMLVIY
CGNLLRSASRTFTKLIEPNPCTDVLLNTITVDNLKSLAYYVVMNYLPLTQ
TERDEWEHDPEAYVNTEAGESHKFLLRPCMETFYVGLFYGFKEHMVPFVV
QLVKEASENFNLESITHEDLLKLCAIYKAVGLSSYELFGEIDFDAWFTGH
LLNVFNLPSDRYAILQQHVIWMVGEWIDVKLSKPNRIHLYRLLSVILESE
HADLVLKLTACKTLRIALDDFDFVLEDFLGFVENVFPALCSLLIRVEECD
TKMMVLNVISLTIQRSGNEVHRHAQMLIQYLPQLWELSDSHNLLRGAVVN
LLHHLVKGLAGESSKINHITIPVLNHSTDVNQPAHIYLLEDGLELWQAVI
SNAPTLNPDLLTLYGNLFALLERASETLESCLAITRSYILIDCQTFPQEY
GVKLSQCFHELAQNMKETGTLSIVAVFKVISQVQPSAFFNSFQVSILDIF
DASLKDENYPILMSQYFTILAYLVVSQPESLFQVGRSYCELNASIGSSYE
ELMGRLFDVWFEKMDCMSLEDKKVSAIAFASLLPLKISFIGERFALMLDS
CVNVLYELQRGDGEDEQPSQDSLVIDWANESIDPNEPQSYESIREKKMMS
QDCVYNFHLLPYLKEKLQQTKSAYGEQLFNEAMSTLDSAVAKQLMTLIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044993XLOC_044993Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072511TCONS_00072511Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001494Importin-beta_N
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0008536Ran GTPase binding
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
molecular_function GO:0005488 binding
molecular_function GO:0008536 Ran GTPase binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..32
IPR001494Importin-beta, N-terminal domainSMARTSM00913IBN_N_2coord: 22..92
e-value: 4.1E-11
score: 52.9
IPR001494Importin-beta, N-terminal domainPFAMPF03810IBN_Ncoord: 22..88
e-value: 9.2E-18
score: 63.8
IPR001494Importin-beta, N-terminal domainPROSITEPS50166IMPORTIN_B_NTcoord: 22..89
score: 18.034
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..949
e-value: 2.5E-53
score: 181.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..948

Blast
[Close]
BLAST of TCONS_00072511-protein vs. Swiss-Prot (Human)
Match: IPO11 (Importin-11 OS=Homo sapiens GN=IPO11 PE=1 SV=1)

HSP 1 Score: 531.946 bits (1369), Expect = 3.318e-174
Identity = 316/967 (32.68%), Postives = 532/967 (55.02%), Query Frame = 0 
Query:    4 LVKALQLAASQNIQEVKAAEEQLKQWETTAGFYPKLLEIFAMRHLEVNIRWIAIICLKNGIDKYWRRVVKNCLPDDEKNFIKQNIMI-FDEVTPELALQLSVVIGRIARNDI-KIWPQCLEVTIEAIKSTNSINQHRGLLTLKQIVKELASKRLASDRRVFHEISSKIFEFLVELCYSSVGRL--------QAGSIQEVDLCLLVTKVLRRLLIYGGKLYDENTPQIRYVKWCVTQVPVFVEL-RNKNTEK--RPKLHKYVLLLMKILTEFEEHQSGSMLPILHDMLQLCLHYILSNRNDCQEDSMLVIYCGNLLRSASRTFT-----KLIEPNPCT----DVLLNTITVDNLKSLAYYVVMNYLPLTQTERDEWEHDPEAY-VNTEAGESHKFLLRPCMETFYVGLFYGFKEHMVPFVVQLVKEASENFNLESITHEDLLKLCAIYKAVGLSSYELFGEIDFDAWFTGHLLNVFNLPSDRYAILQQHVIWMVGEWIDVKLSKPNRIHLYRLLSVILESEHADLVLKLTACKTLRIALDDFDFVLEDFLGFVENVFPALCSLLIRVEECDTKMMVLNVISLTIQRSGNEVHRHAQMLIQYLPQLWELSDSHNLLRGAVVNLLHHLVKGLAGESSKINHITIPVLNHSTDVNQPAHIYLLEDGLELWQAVISNAPTLNPDLLTLYGNLFALLERASETLESCLAITRSYILIDCQTFPQEYGVKLSQCFHELAQNMKETGTLSIVAVFKVISQVQPSAFFNSFQVSILDIFDASLKDENYPILMSQYFTILAYLVVSQPESLFQVGRSYCELNASIGSSYEELMGRLFDVWFEKMDCMSL-EDKKVSAIAFASLLPLKISFIGERFALMLDSCVNVLYELQRGDGEDEQPSQDSLVIDWANES--IDPNEPQSYESIREKKMMSQDCVYNFHLLPYLKEKLQQTKSAYGEQLFNEAMSTLDSAVAKQL 944
            +++ L  A SQ+   +K AEEQLKQWET  GFY  LL IF    L++N+RW+A++  K+GID+YWRRV  + L ++EK  ++  ++  F+E   ++A Q++V+I ++AR D  + WP+ +   IE++K  + + QHR LLT   + K LASKRLA+DR++F++++S I+ F   L                +A  +  ++  LL  KVLR+L + G     +N   + ++     ++  F+E  R+  T+   R +L K ++L  K+L +F +    S  P++   L+  + Y+ +   +       ++ C NL++   + +         + +P T     + +   T   L  +   +V +Y  LT+ E   WE DPE + V    G+S K+ LRPC E  ++ +F+ + + + P ++++++      N+E +    LL   A+Y AVGL++YELF  +DFD WF   LL    +  +RY  L++ VIW++G+WI VK     R  LY  +  +L+ +  DLV+++    TL++ +DDF+F  + FL ++E +F  L  LL +V ECDTKM VL+V+S  I+R   ++  +   L+QYLP LW+ S+ HN+LR A++  L HLV+GL  +S  +    +PV+  STDV+QP H+YLLEDGLELW   + N+P + P+LL ++ N+  LLE +SE L +C  I   YI +    F Q Y V L Q F EL + +   G + ++ V +   +V P      FQ  +  +F   ++ E YP++MS Y  ++   V+ Q  S F       E+        ++L+G + ++W ++MD ++  E +K+SA+A  SLLP   S I ++F  +++  V  L+++   D E     +D +++    E    +  EP + +  R+K +  +D V+   L  ++ EKL+  +   GEQ F   M T+D+ +  QL
Sbjct:   10 VLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNFACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLHGIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSVSYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYPTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEYNQTLTPVLLEMMQTLQGPTNVEDMNA--LLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQ--DLVVRIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVGCLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPHVYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTEFLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIEGERYPVVMSTYLGVMGR-VLLQNTSFF--SSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNITQPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGT-YKDCMLMSHLEEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETVDTEIVTQL 968
The following BLAST results are available for this feature:
BLAST of TCONS_00072511-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IPO113.318e-17432.68Importin-11 OS=Homo sapiens GN=IPO11 PE=1 SV=1[more]
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