Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00072370-protein ID=TCONS_00072370-protein|Name=TCONS_00072370-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1266bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00072370-protein vs. Swiss-Prot (Human)
Match: NPHP3 (Nephrocystin-3 OS=Homo sapiens GN=NPHP3 PE=1 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 7.481e-86 Identity = 335/1214 (27.59%), Postives = 542/1214 (44.65%), Query Frame = 0 Query: 112 LNSEVQRLKTENKTLNSALRKLRADKDRALATEKDAVERANNFELEKEKSQRQFKTYREAKENEIRDLYK-------QIHALQNQSLPTRRDHGNEESIINDALMESGDFRHTRLVNDWLLEGQSGVGVESLAGQQLEENKLKQLAQNSKKSKEVSQTFKAV------------LQSTQEAGYGIPLTNVYSVFVTSTTETKSIADAFM-NQCERLQLQLEPEGKLLTLTYFLTLPPTKLDKTEELTQQHHFSKSNVVIAIVDEATSYFAVSLSTITEALSTNK------ICFICSVNQLSTE-VTTLIEK--DLHAASQVHFIHSEGQTENLISSCYERMANVCKLFHDKQIIQQDLIS-------SNDTSNTLTKVSHDVFKS--WDMLGMEEQSSIQAYFKSKPLPTGAFGREMSY--LNNYITQDGPVMPMLVKGAQGSGISTMFSHWIASIENSLSNSCILYH-VADPHSAYSIDSFHLLRRFLILLLDQLPLIFSVKDTEK---EFPRWLDRACNKHQNGVVIVIDGIDLIENYKEIFKWMLDPLPVPVRVIVSVTGNGAYPNQWNKWSSLVVEG-----NREEALTHCHMKMSKLDNTECVSCQQLIQNIMTNKSYLGLISNHLYRNVLCTVLQYMMSDAEMQTISSRLLNCKSLKDLLSVVL-TILERRHN---KRLFSLVLHWVYFSQNGLTLAELIELGGNDPD-----LLPILFDLESVEILVSINGLVKFVHSVCKETV-FRHLSIPKNIDDASTRTIRQNLVDLFEKKLTLGCVSYRVADELPAQLAALKDKESLFKCLSSIFVFVHLYRRGRLTTLVNYWKILSRDTSAVKDIYCSALQSILDESKDESSFNEQITMLYDLLGDFYKDLGLFSIAQKLLEKSLELKEEHLEPDDILLTRSYFLLARLFTQWKKYQTAEEYLKQALECNDVSTEGASSSIATILEFLAMLCQHQEKGKDADIYRKNAIGLRDTHFFQH-ELVSIKLSLVECTQL-AVTLSESASSHV-TLEETTGWLVSISFIYFHLKQYSEAAEVLQQAL----RYLTKDNNGDMQNYQAVIDIQCKLSFVYTTMGQNDKAESMLERALNIYFTLNLLEDPNLATVINSLVKLYRSQKRMDSLERLHRSHMKAMERYYGVDDIRVAHVINELAVHLSKMNKFEEAIELYEQAMNVYINQLGFQDVHVSEVLSNLAHLFSE 1259 L++E +RL+ E + L +K+ +K+ AL + A+ERA FE +++K +RQFK +RE KENEI+DL + ++ LQ Q + D G +S N D ++ G +G E G ++ + + + + S +V F V LQ T + + +N ++ T ET+ D F+ + +L+ E G YF P ++ ++ KS++VI + + ++ L EA N I ++S++ V LI++ +L+ S+ I G + Y +C ++II+QD++ + D + + D F WD+ +EQ F+ G E Y LN+ + P+ P+LV G GSG S + S WI + + N+ IL H V P S S S + R L L+ + D K EFPRWL++ +HQ ++IVID ID ++ ++ KW++DPLPV VRVIVSV P W W +L ++ + + CH KL + ++ ++ T N LY + ++ + I + C+ L +VL +I E N K L +L V S NG++ +EL+EL P+ L ++ L + +L GL++F H ETV +L P T + RQ L++ F +L+ V++R ADELP K+ L CL ++FV +LY+RG L++YW+ + +D SA+ Y +L+ + E + + + LY+ LG F KDLGL S A L++SLE++E L+PD + +S LA ++ QWKK+ AE+ KQALE ++ + A LE LA L Q Q K + A+ +RK + + + L L QL +TL + + TL E + +Y+ A + L+++L R L D+ Q+ L+ + Q DKAE + ERAL+I + P+LA + L LY+ ++D L+ ++ ++ +G VA + LAV S+M K EA+ LYE+A+ +Y + LG V E L NLA L E Sbjct: 119 LDTENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKRELESKLQRLQAQGIQVF-DPGESDSDDN-----CTDVTAAGTQCEYWTGG--ALGSEPSIGSMIQLQQSFRGPEFAHSSIDVEGPFANVNRDDWDIAVASLLQVTPLFSHSL-WSNTVRCYLIYTDETQPEMDLFLKDYSPKLKRMCETMGYFFHAVYF----PIDVENQYLTVRKWEIEKSSLVILFIH--LTLPSLLLEDCEEAFLKNPEGKPRLIFHRLEDGKVSSDSVQQLIDQVSNLNKTSKAKIIDHSGDPAEGVYKTY-----ICV----EKIIKQDILGFENTDLETKDLGSEDSIPEEDDFGDVLWDIHDEQEQMET---FQQASNSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKNSPNTLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSALTLDPAKLLEEFPRWLEKLSARHQGSIIIVIDSIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETC-PPAWRLWPTLHLDPLSPKDAKSIIIAECHSVDIKLSKEQEKKLERHCRSATT--------CNALYVTLFGKMIARAGRAGNLDKILHQCFQCQDTLSLYRLVLHSIRESMANDVDKELMKQILCLVNVSHNGVSESELMELY---PEMSWTFLTSLIHSLYKMCLLTYGCGLLRFQHLQAWETVRLEYLEGP-----TVTSSYRQKLINYFTLQLSQDRVTWRSADELPWLFQQQGSKQKLHDCLLNLFVSQNLYKRGHFAELLSYWQFVGKDKSAMATEYFDSLKQYEKNCEGEDNMS-CLADLYETLGRFLKDLGLLSQAIVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYGADHPYTARELEALATLYQKQNKYEQAEHFRKKSFKIHQKAIKKKGNLYGFALLRRRALQLEELTLGKDTPDNARTLNE-------LGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLN-------NLAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKLDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHVEALPLYERALKIYEDSLGRMHPRVGETLKNLAVLSYE 1273 The following BLAST results are available for this feature:
BLAST of TCONS_00072370-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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