TCONS_00072330-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072330-protein
Unique NameTCONS_00072330-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length597

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072330-protein ID=TCONS_00072330-protein|Name=TCONS_00072330-protein|organism=Clytia hemisphaerica|type=polypeptide|length=597bp
IRDSYNIIPNFDDFTNFVKDEMKLVNDPMFSREAAGPISYDRASGSDASR
RRGGFRSNATGVDKDQPTPTCPMCKSTQHDLDDCREFLQLDSENRKKYVF
NRRLCFCCLQPNHTARECRSKKTCKVCRMSHPTSLHAPRRRFPPPTATPQ
SNVSPTPPPNVPPTPPPRTDDKIDNVEQSFSNKCTDIHENSVSVSVVPVW
LYHSSNPTKKVSTYALLDSCSQGSFVTEDIMNDLNLNGISTTITIKTLNN
EASEPSFAVNGLVAQPYFEVDGCKNVTLPKLFSRKNLPTEPGEIPTRCSL
AKYTYLKDLLQYVPVNTSNLQFGILIGVNCVRALEPLEVVNSEGNGPYAY
KTRLGWCITGPKSCRQNGTINCRRTSITSSTKIKEESLKDMMIQMYQQDF
VEPDQHQASLSVEDRRFLHTMDTGTKLQDSHYILPVPFRSENLSLPNNRS
QAFNRAMWLKKKLERRDQFRDDYVKFMQELLSKEYVVKCEKPPTVGKVWY
VPHHGVYHPQKPEKIRVVFDCSASFVGRCLNKEILQGPDLINSLVGVLCR
FRSNHVAFMGDIEKMYYQVRLPEEHQDFFRILWWPNGDTNQKLQEYR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044910XLOC_044910Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072330TCONS_00072330Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR021109Peptidase_aspartic_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 104..120
e-value: 0.064
score: 18.6
coord: 70..86
e-value: 2.3
score: 9.0
IPR021109Aspartic peptidase domainGENE3D2.40.70.10coord: 195..335
e-value: 0.001
score: 18.8
NoneNo IPR availableGENE3D3.10.10.10coord: 456..597
e-value: 5.9E-9
score: 35.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..70
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 471..584

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072330-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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