TCONS_00072301-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072301-protein
Unique NameTCONS_00072301-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1515

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072301-protein ID=TCONS_00072301-protein|Name=TCONS_00072301-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1515bp
MGTDVKRSLNQNLPPYEVLYHQLVSLKSDNLDEFTLVIKLSQALKCHGYD
KQASRLAFVLGQKIILTYPERISAGELNFTEITEKAKAICETFTKCSENE
RLTFELAILGLTVPRFPAQTNLEEMKLIYLETELYKCLKGMLITEERLNF
IRYQARKLVTKPMLRGDIVLPYIIAMLVFEILCQENIDSCIYAGPNVKFD
KALQRSKEDELLGYQCALQALGLYSNAVDHKQPMLCESIRQFRRELALVL
LRHYRTHNEKIEEVLCVLLEKERYSFMNQQQHVANPTSTFSHHNQQNHFN
NQATSSNNISDHRNSTREKKNKGRKSSQPQNNANKHGITFVDIEANCGRP
PQPPTQQHLPHERLTERHSDSDSGNDDTTVKRSSGNSHSSKPSSRKSSQQ
HRRHSRQHPNKNRGGASGTHNSPDRRNKTDNPRSSWKQKGLTRNKMKTLN
TGAANNKRSDLTDTDSGQEMNSPYEGDFPWLAQSEDWDNEMSSVASNFNE
NCQPASTEEYLDHEAPSTVWANQTSTHLIDSATNASDQESTKTESPSSSW
VHHHSNDVIEKLPLEENLSTPTPFNTWDGVIQKASASETVIKEAPSTSWG
DSSPMNSNIDEIVVDFNEDDSPHIFPGALPPLDQRGPVAVLPLLPNQHKE
CVDIQPPTDPDEDNFNIDVEMFIDSPHQQNISPGEEESLSDPLITSSSSN
NVSAGSSDSLDLLHRHPNYRQISIDQHPDYQQSVTDRKPTTLQSVTYQSF
ERQNHSLAWNTTTADEHTSHSLADPQNKTRANLPVPKEEKDHRSATDERF
ETPDILTVSNEQIVDERPALQASEDNHEDMATVPVEPIAISENSCLDLPI
QRSASLDIPVNDVMLFGDGADSQQNGSLSRQIHTPATDDLNRGPAVDDVA
DPSNDSLYDSGNDSSPSGAISIVNRKPTHDTKSKTNERTIELKELKTALS
FIQQQSSAQVSSNSSSGSPMEIRNSKTKPSNAEARKLAKQQRKQAKKEKT
KAKNNRNKARLKNTMNMQSIEAEAFSLFELAKALLTQYRNNAMPYFSVDV
DEVVTNTNVNRRLQLAAFEIGIFALNIHNYSSPNWFSRTYSSYVSWIETL
AIEIGTSAIRMLNEKWEGVLTPSEAIQIAGRVSRGGDQVLRRTAVELSLS
CLPYCQSLNSVEVTQTMSMCREQDHELLERACSTLENASRQGGVQPELLF
SVAREWHYLHEEKRKRESAETPSDQNTPRSPSRSGRHNARPQQGNAANFV
PMYLTPEQFVQEQIHQQAQEIFGRQLPRNTPQEQGVWAYHPSYFNQLHHI
PLPQQMMHSRRISNIDTYALPVNNFPDETNFAEIPRYLQNSYRVGMLALK
ALALRMPDDRPETRFAVAPPCSDDFRWLCALAASLGPTYLKNFCKVVYDA
VTSPFLLHDLALEAARNFALYNPAHLTSHLRSPSVSPIVQKALVMFNEKV
HYDLVLLQPNKYNDFVELLRRTRSAFCMAPGGMQRFNDILEMIRKTYPKK
GELWQKIMNGLSTAA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044897XLOC_044897Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072301TCONS_00072301Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 981..1012
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1211..1243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 871..936
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 762..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..711
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 953..1004

Blast
BLAST of TCONS_00072301-protein vs. Swiss-Prot (Human)
Match: ZSWM8 (Zinc finger SWIM domain-containing protein 8 OS=Homo sapiens GN=ZSWIM8 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 7.759e-48
Identity = 98/243 (40.33%), Postives = 140/243 (57.61%), Query Frame = 0
Query:  998 EKTKAKNNRNKARLKNTMNMQSIEAEAFSLFELAKALLTQYRNNAMPYFSVDVDEVVTNTNVNRRLQLAAFEIGIFALNIHNYSSPNWFSRTYSSYVSWIETLAIEIGTSAIRMLNEKWEGVLTPSEAIQIAGRVSRGGDQVLRRTAVELSLSCLPYCQSLNSVEVTQTMSMCREQDHELLERACSTLENASRQGGVQPELLFSVAREWHYLHEEKRKRESAETPSDQNTPRSPSRSGRHNAR 1240
            E  + K  R ++   +  N Q  EA A   FELAK +L +   N+             +   +R L L AFEIG++AL +HN+ SPNW SRTYSS+VSWI   A+EIG++A+ +L E W+G LTP E   +A R SR  D  + R A EL+LSCLP+  +LN  E+ + +  C+EQD+ +LE+AC  +E A++ GGV PE+LF VA +W +L+E+     S       +   S  R+G    R
Sbjct: 1213 EVGRYKGRRPESHAPHVPN-QPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAREGATSCSASGIRAGGEAGR 1454          

HSP 2 Score: 144.821 bits (364), Expect = 1.571e-34
Identity = 71/177 (40.11%), Postives = 109/177 (61.58%), Query Frame = 0
Query: 1337 YLQNSYRVGMLALKALALRMPDDRPETRFAVAPPCSDDFRWLCALAASLGPTYLKNFCKVVYDAVTSPFLLHDLALEAARNFALYNPAHLTSHLRSPSVSPIVQKALVMFNEKVHYDLVLLQPNKYNDFVELLRRTRSAFCMAPGGMQRFNDILEMIRKTYPKKGELWQKIMNGLST 1513
            +L  +YRVGMLAL+ L  R  +D P   F+ +PP +DD +WL  LAA LG  Y+  FC      V SPF+L ++ +E  +     +PAH  +HLR+P+   +VQ+    + + +H+ L+ L P  Y+DFV  +R  RSAFC+ P GM +FNDIL+ ++++   K ELWQ++   ++T
Sbjct: 1663 HLHAAYRVGMLALEMLGRRAHNDHPNN-FSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIVMETLQRL---SPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTK-ELWQRVSLEMAT 1834          

HSP 3 Score: 93.9745 bits (232), Expect = 4.514e-19
Identity = 65/252 (25.79%), Postives = 120/252 (47.62%), Query Frame = 0
Query:   19 LYHQLVSLKSDNLDEFTLVIKLSQALKCHGYDKQASRLAFVLGQKIILTYPE-------------RISAGELNF--TEITEKAKAICETFTKCSENERLTFELAILGLTVPRFPAQTNLEEMKLIYLETELYKCLKGMLITEERLNFIRYQARKLVTKPMLRGDIVLPYIIAMLVFEILCQENIDSCIYAGPNVKFDKALQRSKEDELLGYQCALQALGLYSNAVDHKQPMLCESIRQFRRELALVLLRHYR 255
            L+  L  L+ ++  E  ++   ++AL  HGY  +ASRL   L Q ++   P+             ++S     +  T    KA  +    ++  E+  L F + +  L + R PA T   E+KL Y E+E+   LK + +    ++ +R +A +L    +     VLP ++A  +F++LC           P+  ++     +  DE LG++ A+ ALG+ +   + + P+LCE  R+ + +LAL L+  Y+
Sbjct:  757 LFAGLKPLEQESRME--VLFACAEALHAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLSKAAFLLTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMSTMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPGSRP-----PSRNWNS---ETPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYK 998          
The following BLAST results are available for this feature:
BLAST of TCONS_00072301-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZSWM87.759e-4840.33Zinc finger SWIM domain-containing protein 8 OS=Ho... [more]
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