|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00072148-protein ID=TCONS_00072148-protein|Name=TCONS_00072148-protein|organism=Clytia hemisphaerica|type=polypeptide|length=823bp
MNLQLWHVSVCFVFILQNFTTISMTITSNSDKSKREKIVRITIEHVDVPN
TQQSIADIKRAPALQKQILLLKEKESVRKQDEQKKKIESKILSRLSNLLA
KVKDIKQRHFHHHGDSEVDDKEGQEVIPSAAKVVHHHPHHKSHHHKHQSP
VATRKTYHHGERPALHLPNEGMDSGDNVDINITETSGIADENSLRTIENE
EQYGDQLNRFQNGIKESTTSKNIGNLPATNLTKSTSSDILYTINKGNKSV
SDGSKSKQSNDENSYKILVKDYELSSGNDDSDEDEDITFKKPTMDQKLVG
KNLTHSTSDSQFFANTSASIGKTNVNVTSQEDFEVVNSNELSQQKQYDTQ
SADVSRIQRPDDSEQISKHQGDSHEIGFKIPESKIDFVIQPKPDLHSGDK
GNTFDPTTRHLGDNNDKINVQIASTRYMGDKNDWGNGTPMISSEDIHYWD
KEKKTKANINNVNHKMKDFSSNFFTATMRHDQEDKANDEDDFEEKVDNKN
RTSLEHDTEDASSEKKNSTVVSLEENNSNEKFSNNSMLNLNRKTNSTMIE
KGSNVQNLQNNKTLDLEDNKKLKNEEENFTNISKNNTLLQSETLSNATFG
DSGVVRDSSMINSSRNVESANRSNLSSNESLSKDIFDGNIERESKQKQDQ
IQLVVESEPGSASKIPQNVNIGPHSGLQIAKINITKIKEMDKLQKNITAE
FLNKNSASLTQSNNTQQDFKKRLKSRLQLMSEKRQLFNRTAKMADENARL
IVVTPTKLNENAHSREIDEFCSMKVTASYADPNDCSKYWLCAGGKKYETH
CPGDLVYNNVISSCDDPKSSKNQ Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002557 | Chitin-bd_dom |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006030 | chitin metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006030 |
chitin metabolic process |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0008061 |
chitin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 555..592 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 483..536 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 245..264 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 134..157 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 342..372 |
| IPR002557 | Chitin binding domain | SMART | SM00494 | chi_10 | coord: 769..821
e-value: 6.4E-7
score: 39.0 |
| IPR002557 | Chitin binding domain | PFAM | PF01607 | CBM_14 | coord: 771..819
e-value: 3.5E-10
score: 39.8 |
| IPR002557 | Chitin binding domain | GENE3D | 2.170.140.10 | | coord: 761..822
e-value: 3.9E-11
score: 42.2 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 768..823
score: 11.782 |
| IPR002557 | Chitin binding domain | SUPERFAMILY | 57625 | Invertebrate chitin-binding proteins | coord: 767..818 |
Blast
The following BLAST results are available for this feature:
|
