TCONS_00072102-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00072102-protein
Unique Name	TCONS_00072102-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	495

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00072102-protein ID=TCONS_00072102-protein|Name=TCONS_00072102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=495bp
MATPFERYCCLYREYSVYSQLTIPIVMDVLREKCYTPLNQMNLNLTEGNA
EMNRRKNEFLLWFWRNTTMYQFKDCSSSSSANSDATIVENFCSKDTEPTY
KIYVAFWALLLIMIVLNNLLIIVSVLKVPHLRNNVANLFIISLSCSDLFV
GLFVIPIKIGMFSNNMVFCYGINICRANMMTDSWAFVTTIANLVAIAVDR
HLALNHPYKYPNWVTRRRAKLVILGTWVYGFCISCLINVKLDSPSQDAVV
IEGLMCQMNRNYIYYGLLYGLNFCIPVICMGIIYFRILRITKNHARSISE
SVILDNNRVILQQMSEDQNNNNNTMNNEPVVLEMTVKKNGGTNSNESRRG
SYTEHYTIENKHSNNDTKTTTDFKQTSRTLRRSSSKSMDQYRRIVRKAAQ
TVAAVYGTYVICWIPIAVFTVVVMFCKDSKDTSSCTHVQDWPHLYLVLIH
FLPLVNSMMNAFLYATMNTQFRRGFRKVLGIDQIKSWLKLKILKQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044780	XLOC_044780	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00072102	TCONS_00072102	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000276	GPCR_Rhodpsn
IPR017452	GPCR_Rhodpsn_7TM

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000276	G protein-coupled receptor, rhodopsin-like	PRINTS	PR00237	GPCRRHODOPSN	coord: 265..288 score: 23.05 coord: 218..239 score: 22.81 coord: 182..204 score: 28.9 coord: 398..422 score: 24.29 coord: 446..472 score: 27.22 coord: 136..157 score: 31.24 coord: 102..126 score: 19.37
IPR000276	G protein-coupled receptor, rhodopsin-like	PFAM	PF00001	7tm_1	coord: 118..464 e-value: 3.5E-42 score: 144.4
IPR000276	G protein-coupled receptor, rhodopsin-like	PROSITE	PS00237	G_PROTEIN_RECEP_F1_1	coord: 188..204
None	No IPR available	GENE3D	1.20.1070.10		coord: 69..487 e-value: 1.9E-64 score: 217.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..385
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 384..481 coord: 84..296
IPR017452	GPCR, rhodopsin-like, 7TM	PROSITE	PS50262	G_PROTEIN_RECEP_F1_2	coord: 117..464 score: 33.311

Blast

[Close]

BLAST of TCONS_00072102-protein vs. Swiss-Prot (Human)
Match: DRD3 (D(3) dopamine receptor OS=Homo sapiens GN=DRD3 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.271e-23
Identity = 104/411 (25.30%), Postives = 177/411 (43.07%), Query Frame = 0

Query:   89 ENFCSKDTEPTYKIYVAFWALLLIMIVLNNLLIIVSVLKVPHLRNNVANLFIISLSCSDLFVGLFVIPIKIGMFSNNMVFCYGINICRANMMTDSWAFVTTIANLVAIAVDRHLALNHPYKYPNWVTR---RRAKLVILGTWVYGFCISCLINVKLDSPSQDAVVIEGLMCQM-NRNYIYYGLLYGLNFCIPVICMGIIYFRILRITKNHARSISESVILDNNRVILQQMSE----DQNNNNNTMNNEPVVLEM----TVKKN---GGTNSNESRRGSYTEHYTIENKHSNN-DTKTTTDFKQTSRTLRRSSSKSMDQYRRIV----RKAAQTVAAVYGTYVICWIPIAVFTVVVMFCKDSKDTSSCTHVQDWPHLYLVLIHFLPLVNSMMNAFLYATMNTQFRRGFRKVL 479
            EN         +  Y   +  L++ IV  N L+ ++VLK   L+    N  ++SL+ +DL V   V+P  + +     V+ +    C   +  D      +I NL AI++DR+ A+  P  Y +   +   RR  L+I   WV  F +SC +    ++     V      C + N +++ Y  +  ++F +P     ++Y RI  + K   R           R++ +Q S+           T++ +P  LE+    ++ ++   GG    E R G         N  S     K + + ++ S     +S K      R V    +KA Q VA V G +++CW+P  +  V+   C+      +C HV   P LY     +L  VNS +N  +Y T N +FR+ F K+L
Sbjct:   18 ENSTGASQARPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTT-TNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASILNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTV------CSISNPDFVIYSSV--VSFYLPFGVTVLVYARIYVVLKQRRR----------KRILTRQNSQCNSVRPGFPQQTLSPDPAHLELKRYYSICQDTALGGPGFQE-RGGELKREEKTRNSLSPTIAPKLSLEVRKLSNGRLSTSLKLGPLQPRGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQ------TC-HVS--PELYSATT-WLGYVNSALNPVIYTTFNIEFRKAFLKIL 398

The following BLAST results are available for this feature:

BLAST of TCONS_00072102-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00072102-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DRD3	6.271e-23	25.30	D(3) dopamine receptor OS=Homo sapiens GN=DRD3 PE=...	[more]

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TCONS_00072102-protein (polypeptide) - C. hemisphaerica