TCONS_00072097-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072097-protein
Unique NameTCONS_00072097-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2381

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072097-protein ID=TCONS_00072097-protein|Name=TCONS_00072097-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2381bp
KLPQNDTDFIENLISLLTASQKYMRSRKNECSFVSLRDVERSVQVASWFY
KVYTGYQLQNCPKDILKQILILTIAVCYIARLEKRHEFLKYIAPFFKGRF
HFDGGTLKLKELIKDYQREFVDDLQVKENIAKNEALCENIFMMVVCIELR
IPLFIVGKPGSSKSLAKTIIQDNMQGSSSASPLFRKFKEIFVTSYQCSPH
STADGIISVFRQAQNYQQDRNLDLFASVVVLDEVGLAEDSPKMPLKALHP
LLEDGTDGFEDLRDAEKEEARYRKTTGAEKRVAFIGISNWALDPAKMNRG
IMLKRNMLDLTELISTASEICSSNERIRDKIKFLLKPLSEAFYKLYNMQK
ENPTLIKHRKEEFFGMRDFYSLIKMIFCAAKFYNGMPPLHEIELAVLRNF
SGLEQYDMWAIFRDVLTSSPLANALGTIELEISAADMIRKNFEKNCLCCS
LTPTVKRCQTNRYLLIMTEKYSSLPIIKGMELDVPENLSVIFGSSFPKDQ
EFTQVCRDINKIKICMETGRTVILLNMENLYESLYDALNQYYVEFGGKNY
VDLGLGTHRVRCRVHEDFKLIVVADKKVVYELFPIPLINRLEKHFLTMTS
SLEPYQLRHAKELMEWAKQVASNSNRSKSTEEGMFVGYNSDTCGAIIMQL
CQKGVQEDQLFERGQDALIKIATPDGILRSKNKHMIQTYFNNQKHDSLKL
YLQDQLSSQNPSKYLQVTTHSRLLSLNECQTIAGEDSSVTMFSLVQFETD
HSFRHSIKTFLETKKSDEQKNFLFIQYNMTATSGNLITCAQHITEELCLQ
HTLQDNTFIVFILQITRRFDSTLSGLSCSQAHWDYIHIDDLREPDIHMPS
FMKYLDRPMSDLFAPDCQEDLSMLIKGSVPSAMKTLNTMGETRIDELAAK
LRVVNHLFDKNKVFSSTVISEIHKQLLHKESQVLPEHSKGWVMREAVEQH
YIPNYGTFRASLALCVEDKVIPVWKSLLTLMDENSNLMVLHQGMDLYGGL
WTLLFQAFTTSGEHNEKPIEESKQSNYSRFPFSKRISLMLDNVMQTYVIG
ASEEDKRENLSKAMNGLSINSLLSNLSNEQIEDYKKDFLMYKFPGLAQQG
YQILNDNMSWSAAQQSDGEPQAAHSRIGDIHVAHQDFERSCLAKIFSFKP
DLLLRSLFFDKSILKNIDRTVLKFLLNHYNKLFEETDVHSIQKINSELQK
LNKFLKDVFVLLDIDVFPNIKLMWEKLQIVQIFIQHVINENGALDTILIF
WNSLESDLHMCISEEGGWLTIETIFTETIRSTYNPSFRQACCQCLISLLD
EFIVKKCGQSPHMVETALRYIFHASVDIPSSQISPVEGFAIHSTPMLKMY
LLQSLIQRNIDVEEYLERFLEERLLLLENLNVIDICKMFMFTYQDKLSRD
VFDNISLEEAYHSTSLLSNIATEMKSATFYLTSSTLQTDQPVTLDSLKMV
AKLRMCFEFVSKMMYQRFLTNTKFNDDVCGLQDDLFHIVLEFLTSSGRET
EPHLFILRNVIFDYGFDELKLLVKKSGFNFGLNFEEIAESLNSDPFLVYG
GPYVDVKRKLPHDITQLPNKKNGKDLLWSLGTMQKYILSVPPQGVKNNAR
KVGNENFIYNVEMMEIDGGLKQLLHHFNCIMDHCDDPQSLLYFFKVIKTE
PLQSQKWYFPTMPSDPFAVVDEFRKKNTNMNFVPHACPNGHIYVITECGR
AYTEAKCPEKGCGLRIGGHAHILDDKNKKVESRDNTERGHCLGSIKERKY
DSGERDLNNLSTALIRFLLHMAMLSGDAYKTNQALNIALKERDGTSVESF
LISHLKKDLEFIKSSLDRNNEETRLALHVLLKIIADKKSTSLGFNLPEMR
DQKKRSELETRLDQVFIQPFCHSYEMELRKFQNALADTQTIYRDLYEIEI
KENTSLSPFNVMTSTFLWCYRLPVTFNHFKGLLQNKASSNSEGNRQLITL
FEKTYIYEIMELLPDIIEFQSILYKHLNFQLDKATSRQTTLKSVLETLPV
DSGKRLNGLKESIFKVWNILRSDLKNHGLFQREKNFPGNEMNENWPISFL
LSSDSGDGRYLKTLLVLMATAQNELLGSYKELATLPTPLIKKECRELDKS
DVIIYRPEEDLKPLVYRYSDFSIRCGEGRFVTYHYDNIETRLMEHVCFDK
CLIDTASIPIYRYQDEIRGTDRFLNLSRKMKQVAIGPSEQRQMMSELIGV
HQVSDTLKGVEIAIGFLSSTGGEPSLLYAEYLKDILHMELEKFLPSMKMQ
DEITLSHLSSCWTMLTVERALRSQNPFACEEIFMEGLDFDQLAQTRLILD
RLDLHILIGLLTEYIVCDLPMRGPNDVTFELGEALFLYNEERKAYDTDLI
ESMIEQIPMDIQVAHAEPFWREVAAAFKQNQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044779XLOC_044779Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072097TCONS_00072097Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 142..597
e-value: 9.2E-19
score: 66.9

Blast
BLAST of TCONS_00072097-protein vs. Swiss-Prot (Human)
Match: RN213 (E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens GN=RNF213 PE=1 SV=3)

HSP 1 Score: 637.876 bits (1644), Expect = 0.000e+0
Identity = 373/912 (40.90%), Postives = 534/912 (58.55%), Query Frame = 0
Query:    2 LPQNDTDFIENLISLLTASQKYMRSRKNECSFVSLRDVERSVQVASWFYK-------------VYTGYQLQNCPKDILKQILILTIAVCYIARLEKRHEFLKYIAPFFKGRFHFDGGTLKLKELIKDYQREFVDDLQVKENIAKNEALCENIFMMVVCIELRIPLFIVGKPGSSKSLAKTIIQDNMQGSSSASPLFRKFKEIFVTSYQCSPHSTADGIISVFRQAQNYQQDRNLDLFASVVVLDEVGLAEDSPKMPLKALHPLLEDGTDGFEDLRDAEKEEARYRKTTGAEKRVAFIGISNWALDPAKMNRGIMLKRNMLDLTELISTASEICSSNERIRDKIKFLLKPLSEAFYKLYNMQKENPTLIKHRKEEFFGMRDFYSLIKMIFCAAKFYNGMPPLHEIELAVLRNFSGLEQYDMWAIFRDVLTSSPLANALGTIELEISAADMIRKNFEKNCLCCSLTPTVK------RCQTNRYLLIMTEKYSSLPIIKGMELDVPENLSVIFGSSFPKDQEFTQVCRDINKIKICMETGRTVILLNMENLYESLYDALNQYYVEFGGKNYVDLGLGTHRVRCRVHEDFKLIVVADKKVVYELFPIPLINRLEKHFLTMTSSLEPYQLRHAKELMEWAKQVASN-----SNRSKSTEEGMFVGYNSDTCGAIIMQLCQ----KGVQED---QLFERGQDALIKIATPDGILRSK--------NKHMIQTYFNNQKHDSLKLYLQDQLSSQNPSK---YLQVTTHSRLLSLNECQT----IAGEDSSVTMFSLVQFETDHSFRHSIKTFLETKKSDEQKNFLF-IQYNMTATSGNLITCAQH-ITEELCLQHTLQDNTFIVFILQITRRFDSTLSGLSCSQAHWDYIHIDDLREPDIHMPSFMKYLDRPMSDLFAP 865
            L +N T  I     +L ASQ +MR  ++ECSFVSLRDVER V+V  WF++               +     +  +D +   L+L I VCY A LEK+  + K IA FF   +  D   L L E+ +  Q  F+D + +++ IAKN AL EN+FMMVVCIEL+IPLF+VGKPGSSKSLAKTI+ D MQG ++ S LFR  K++ + S+QCSPHST  GIIS FRQ   +QQ ++L  + SVVVLDEVGLAEDSPKMPLK LHPLLEDG    ED                  K+V F+GISNWALDPAKMNRGI + R   + TELI +A  ICSS+  ++D+++      ++A+           T+ K + +EFFG+RD+YSLIKM+F AAK  N  P   +I  AVLRNFSG +      IF   L + P A        E+S   +I++N           P+ K          +RYLL++T+ Y +L I++    +  +   +IFGS FPKDQE+TQ+CR+IN++KICMETG+ V+LLN++NLYESLYDALNQYYV  GG+ YVDLGLGTHRV+CRVH +F+LIV+ +K VVY+ FPIPLINRLEKH+L + + LE +Q    +EL  W ++  +        R K +   +F+GY+SD C ++++Q+ +    + + E+   ++ E  +  L+  ATPD ++R           + + Q YF+ Q+H+S   +LQ  L + +  +   + ++TT SRLL+ ++C+     + G     T+  L QF+T++SF   ++  L    + + K  +F   +     S  LI  A++ +  E+      +D  F+ FI +++R    T + +      W  +HIDDLR   + +    +     +S LFAP
Sbjct: 2607 LDENGTRVI---TEVLCASQGFMRKTEDECSFVSLRDVERCVKVFRWFHEHSAMLLAQLNAFLSKSSVSKNHTERDPVLWSLMLAIGVCYHASLEKKDSYRKAIARFFPKPY--DDSRLLLDEITR-AQDLFLDGVPLRKTIAKNLALKENVFMMVVCIELKIPLFLVGKPGSSKSLAKTIVADAMQGPAAYSDLFRSLKQVHLVSFQCSPHSTPQGIISTFRQCARFQQGKDLQQYVSVVVLDEVGLAEDSPKMPLKTLHPLLEDGC--IED-------------DPAPHKKVGFVGISNWALDPAKMNRGIFVSRGSPNETELIESAKGICSSDILVQDRVQGYFASFAKAY----------ETVCKRQDKEFFGLRDYYSLIKMVFAAAKASNRKPSPQDIAQAVLRNFSGKDDIQALDIF---LANLPEAKC----SEEVSPMQLIKQNI--------FGPSQKVPGGEQEDAESRYLLVLTKNYVALQILQQTFFEGDQQPEIIFGSGFPKDQEYTQLCRNINRVKICMETGKMVLLLNLQNLYESLYDALNQYYVHLGGQKYVDLGLGTHRVKCRVHPNFRLIVIEEKDVVYKHFPIPLINRLEKHYLDINTVLEKWQKSIVEELCAWVEKFINVKAHHFQKRHKYSPSDVFIGYHSDACASVVLQVIERQGPRALTEELHQKVSEEAKSILLNCATPDAVVRLSAYSLGGFAAEWLSQEYFHRQRHNSFADFLQAHLHTADLERHAIFTEITTFSRLLTSHDCEILESEVTGRAPKPTLLWLQQFDTEYSFLKEVRNCL--TNTAKCKILIFQTDFEDGIRSAQLIASAKYSVINEINKIRENEDRIFVYFITKLSRVGRGT-AYVGFHGGLWQSVHIDDLRRSTLMVSDVTRLQHVTISQLFAP 3469          

HSP 2 Score: 144.821 bits (364), Expect = 4.733e-34
Identity = 187/793 (23.58%), Postives = 342/793 (43.13%), Query Frame = 0
Query: 1616 IDGGLKQLLHHFNCIMDHCDDPQSLLYFFKVIKTEPLQSQKWYFPTMPSDPFAVVDEFRKKNTNMNFVPHACPNGHIYVITECGRAYTEAKCPEKGCGLRIGGHAHILDDKNKKVESR-DNTERGHCLGSIKERKYDSGERDLNNLSTALIRFLLHMAMLSGDAYKTNQALNIALKE--RDGTSVESFLISHLKKDLEFIKSSLDRNNEETRLALH-VLLKIIADKKSTS----LGFNLPEMRDQKKRSELETRLDQVFIQPFCHSYEMELRKFQNALADTQTIYRD-----LYEIEIKENTSLSPFNVMTSTFLWCYRLPVTFNHFKGLLQNKASSNSEGNRQLITLFEKTYIYEIMELLPDIIEFQSILYKHL-NFQLDKATSRQTTLKSVLETLPVDSGKRLNGLKESIF-KVWNILRSDLKNHGLFQREKNFPGNEMNENWPISFLLSSDSGDGRYLKTLLVLMATAQNELLGSYKELATLPTPLIKKECRELDKSDVIIYRPEEDLKPLVYRYSDFSIRCGEGRFVTYHYDNIETRLMEHVCFDKCLIDTASIPIYRYQDEIRGTDRFLNLSRKMKQVAIGPSEQRQMMSELIGVHQVSDTLKGVEIAIGFLSSTGGEPSLLYAEYLKDILHMELEKFLPSMKMQDEITLSHLSSCWTMLTV---ERALR-SQNPFA-CEEIFMEGLDFDQLAQTRLILDRLDLHILIGLLTEYIVCDLPMRGPNDVT-------FELGEALFLYNEERKAYDTDLIESMIEQIPMDIQVAHAEPFWREVAAAFKQNQ 2381
            +DG + ++  H   ++  C     LL   K +   P      + PTMP D  A   + R+         + CPNGH   + ECGR   ++ C +  C   IGG  H   D    V+ + D T+ GH LG+ + R   + +R L  +   LIR L H+A+L G A +++QAL   +K   RD    + FL  H+ KDLE +   L  + +ET   +H VL +++ ++   S    L F+  E+  ++ R+  E  +  V I P     +  L    N ++  + I  +     +Y   +     L   +V+  + +W  R  +T  + + +++ K  +  E    L    +K     +++ LP+I+  Q  L K   N Q  + +S    ++  L     D  ++L   + ++F   WN LR  L+ +G     K++   +++ +     LL    G G     L+  +    NE++ + ++L+         +  E+ +  VI Y  E DL PL+     + +  G      +  + I+ +++      K  +    IP   Y+ +      F+++  KM Q ++  S    +  +L       + L  VE+ +GFLS+ GG+P++    Y +DIL M  ++ +  +K  +   L H  + W  L+    E+ LR  + PF      +   L  +        L++  L   +  L E I+  L ++ P   T       + L + L  Y + +   +++++  M  Q P +I +A     W+  AA  K N+
Sbjct: 4439 LDGTVTEMAIHAAAVL-LCGQ-NELLEPLKNLAFSPATMAHAFLPTMPEDLLA---QARRWKGLERVHWYTCPNGHPCSVGECGRPMEQSICID--CHAPIGGIDHKPRDGFHLVKDKADRTQTGHVLGNPQRRDVVTCDRGLPPVVFLLIRLLTHLALLLG-ASQSSQALINIIKPPVRDP---KGFLQQHILKDLEQLAKMLGHSADETIGVVHLVLRRLLQEQHQLSSRRLLNFDT-ELSTKEMRNNWEKEIAAV-ISPELEHLDKTLPTMNNLISQDKRISSNPVAKIIYGDPVTFLPHLPRKSVVHCSKIWSCRKRITVEYLQHIVEQK--NGKERVPILWHFLQKEAELRLVKFLPEILALQRDLVKQFQNVQQVEYSS----IRGFLSKHSSDGLRQLLHNRITVFLSTWNKLRRSLETNGEINLPKDYCSTDLDLDTEFEILLPRRRGLGLCATALVSYLIRLHNEIVYAVEKLSK-ENNSYSVDAAEVTELHVISYEVERDLTPLILSNCQYQVEEGRETVQEFDLEKIQRQIVSRFLQGKPRLSLKGIPTLVYRHDWNYEHLFMDIKNKMAQDSLPSSVISAISGQLQSYSDACEVLSVVEVTLGFLSTAGGDPNMQLNVYTQDILQMG-DQTIHVLKALNRCQLKHTIALWQFLSAHKSEQLLRLHKEPFGEISSRYKADLSPENAKLLSTFLNQTGLDAFLLELHEMII--LKLKNPQTQTEERFRPQWSLRDTLVSYMQTK---ESEILPEMASQFPEEILLASCVSVWK-TAAVLKWNR 5204          
The following BLAST results are available for this feature:
BLAST of TCONS_00072097-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RN2134.733e-3440.90E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens... [more]
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