TCONS_00072028-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00072028-protein
Unique Name	TCONS_00072028-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1670

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00072028-protein ID=TCONS_00072028-protein|Name=TCONS_00072028-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1670bp
VTEISITMINKKANDGGQHTANIPMTKFVSCEDSDTDYEDAPNSNPVNFF
ERFKIYGDVALAISSGKRISRDSKDGEEEDEKKTVEQIEPSLVNTNAYGQ
LEFLKASRKTIAKFLRLADTTDTSDVVHLFSKKWDLRLSELQLLISVVGG
YDTHVKLSPEIQSSLTQSFRWIAETMKPWIITCGIDCGVHKLVGDILQGH
KYNETVLLGIANWDIVNGRESLATNDEQTAIKYPVVHPIDQKMVKEKSQA
DEILLNKDHSYFLLVDFPKGHEHKANQFRSQLENKLVAVQQVVTRPLADP
HRCAQTDGDSEETFKPAIQIMVNGGPESIEIASLNLEMKTMPLILLADTG
GAADLLCKACQLYDEHDTEDIASMAKIFEEEIKKTFLDYSDDSQKVLKQL
LKCAKFKSSITIFHANQNLSLDQVILEVLLKRPEPAPSKSFDGLKVDRKF
FQQLELASTWKRADVAKRKLFKGGIGFTHHPKELEDFLCEEMHKNRVATV
ELLLDTGFDIKVIDYNQLGYLYFKRYEMEYKGLVKKEKVWLKLFLDDEKV
KEFQNELDRNQMAVDEQRRNYSRKAGKKTEYIHLKLIQQALIDLCGIDLF
PYDALKSYAPLQKLVYPFGELFLWAVFCNMHQMAVMLWGRGDEVLARALM
ARKIYREMKRGCRNKFSSVDEALLQQLEANENEFSELALGILKNCDISDK
EATKELLFKPVYDKSDLTCWTLATSSNFQEFMEHPVCQSIVMERWCGELQ
LQGSLITIWVIGAIFFPPLVFKLPYDESKRTKCIDDELCKSQKRSVLQRI
HSSLYHSRISMFHRAPITKFFTNLFSFLVFLGLFIFVLQSKFKEKPSTSE
WVLVAYVVSFTTEELRQIVYSKGMNARQLLRSWWKQAWNKMDLVAILLFY
TALGFRLSGNKQIIEIGRVLYTLDLMVWILRLLDFFSVNKKLGTYVVMIK
KMTADVLNFVVIFFVFWLSYALARTFILERSESFTFNDLRHFIIPYFEMY
GEMFVSPMEANANTTMFGTPKYHSYHEAMVAVIMVIYLLFTNLLLVNLLI
ALFNNTYASVQTNSNRVWKWQWYLLVEGYIERPILVPPFILISHIYQFVC
FMVKKCCTPTIQKKRASKKKKKNYAGQFNRQFSLKSFLLETNGYFDEKER
HDKERQKYQLKMFRLMKFEEECQQTYLANLSALTPQERKLDQVIERTNQL
ENVLVKTLDKVLEMDKRLNSLDQIRSRLQRLQFGPVEQIRQTPKDRRTPE
KKSFDYRRMHSNMSDVANRHASASRSMSLQADAMFLGKKNNLVPTNSNPL
RETAINNERNRKSNELDEIYSQVGSLNAKTEEQVPEAEEDNRPPVEGNIY
EQPASLVQRRSLKDIKLDIPPEIDHFNPPKEDKFIHVLSRSMKYPFTDIR
RFYFPDSMVDWKVEFPAYSPKPYTSIVVDALEDHGKEEEDPRKLSFNALD
GRIDRRSFCGIYDVVSGYPRNPIGRTGISGRGCLKRFGPNHIIELIITRR
KNVSLEATNDEREYFEVLVVRNDSADDQYKLPSGEHIGKRPFISRLQKLL
CNETLSQLGMGAKEIVRNHATATSVFLENNERKIYEGYMDDERNTDNAWL
ETSVRHFHDDADALKKFFLNEEAVNNLKLCWILMHEGAHLPDHQLFYLQE
VVSHCKVSFDALPETVYDYI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044726	XLOC_044726	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00072028	TCONS_00072028	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005821	Ion_trans_dom
IPR015797	NUDIX_hydrolase_dom-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0005216	ion channel activity
GO:0016787	hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006811	ion transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005216	ion channel activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 550..570
None	No IPR available	GENE3D	1.10.287.70		coord: 817..1062 e-value: 4.6E-8 score: 32.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1290..1314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1327..1348
IPR005821	Ion transport domain	PFAM	PF00520	Ion_trans	coord: 819..1063 e-value: 1.1E-18 score: 67.3
IPR015797	NUDIX hydrolase domain-like	SUPERFAMILY	55811	Nudix	coord: 1384..1534

Blast

[Close]

BLAST of TCONS_00072028-protein vs. Swiss-Prot (Human)
Match: TRPM3 (Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4)

HSP 1 Score: 378.252 bits (970), Expect = 3.595e-107
Identity = 321/1130 (28.41%), Postives = 526/1130 (46.55%), Query Frame = 0

Query:   68 RISRDSKDGEEEDEKKTVEQIEPSLVNTNAYGQLEFLKASRKTIAKFLRLADTTDTSDVVHLFSKKWDLRLSELQLLISVVGGYDTHVKLSPEIQSSLTQSFRWIAETMKPWIITCGIDCGVHKLVGDILQGH---KYNETVLLGIANWDIVNGRESLATNDEQTAIKYPVVHPIDQKMVKEKSQADEILLNKDHSYFLLVDFPKGHEHKAN-QFRSQLENKLVAVQQVVTRPLA----DPH------RCAQTDGDSEETFKPAIQIMVNGGPESIEIASLNL-EMKTMPLILLADTGGAADLLCKACQLYDEHDTEDIASMAKIFEEEIKKTFLDYSDDSQKVLKQLLKCAKFKSSITIFH--ANQNLSLDQVILEVLLKRPEPAPSKSFDGLKVDRKFFQQLELASTWKRADVAKRKLFKGGIGFTHHPKELEDFLCEEMHKNRVATVELLLDTGFDI-KVIDYNQLGYLYFKRYEMEYKGLVKKEKVWLKLFLDDEKVKEFQNELDRNQMAVDEQRRNYSRKAGKKTEYIHLKLIQQALIDLCGI-DLFPYDALKSYAP--------------LQKLVYPFGELFLWAVFCNMHQMAVMLWGRGDEVLARALMARKIYREMKRGCRNKFSSVDEALLQQLEANENEFSELALGILKNCDISDKEATKELLFKPVYDKSDLTCWTLATSSNFQEFMEHPVCQSIVMERWCGELQLQGSLITIWVIGAIFFPPLVFKL--------PY---------------------------------------DESKRTKCIDDELCKSQKRSV-LQRIHSSLYHSRISMFHRAPITKFFTNLFSFLVFLGLFIFVLQSKFKEKPSTSEWVLVAYVVSFTTEELRQIVYSKGMNARQLLRSWWKQAWNKMDLVAILLFYTALGFRLSGNKQIIEIGRVLYTLDLMVWILRLLDFFSVNKKLGTYVVMIKKMTADVLNFVVIFFVFWLSYALARTFILERSESFTFNDLRH-FIIPYFEMYGEMFVSPM-------EANANTTMFGTPKYHSYHEAMVAVIMVIYLLFTNLLLVNLLIALFNNTYASVQTNSNRVWKWQWYLLVEGYIERPILVPPFILISH---IYQFVCFMVKK 1105
            R+SR+    E+    K   Q+ P    T+A+G +EF        A ++R++  T    ++HL +K+W L L   +LLISV GG   + +L P+++    +     A T   WI T G++ GV + VGD L+ H      +   +GIA W IV  +E L   D        VV P  Q M    S+    +LN  HS+F+L D     ++ A  + R QLE K +++Q++ TR L     D           Q D        P + ++V GGP  I I    L +   +P+++   +G A+D+L    + Y E       S+       I+KTF      +Q +   L++C K K  IT+F   +  +  +D  IL  LLK    +                QL LA  W R D+A+ ++F  G  +      LE  + + +  +RV  V+LL++ G  + + +  ++L  LY  R+            V       D ++      L    +     R NY+RK  +   +      +   + L G+ D  P    +                  +    +PF EL +WAV     +MA+  W  G+E +A+AL+A K+ + M          VD+ + Q+L  N  +F +LA+ +L      D++   +LL   + + S+ TC  LA ++  ++F+ H   Q ++ + W G L+++ +   + VI  I  PP +  L        PY                                        ES R K  D+E  +S+ R + L R        +I  F+ API KF+    +++ +L LF +++  K +  PST EW++++Y+ +   E++R+I+ S+     Q ++ W ++ WN  DL+AILLF   +  RL  ++     GRV+Y ++++ W +RLLD F VNK LG YV+MI KM  D++ FV+I  V  +S+ +AR  IL  +E  ++   ++ F +PY+ +YGE+F   +       E   +  +   P   +    +V  IM  YLL  N+LLVNLLIA+FNNT+  V++ SN+VWK+Q Y L+  + ERP+L PP I+ SH   I+Q +C   +K
Sbjct:  114 RLSRNDIQSEKWSISKHT-QLSP----TDAFGTIEFQGGGHSNKAMYVRVSFDTKPDLLLHLMTKEWQLELP--KLLISVHGGLQ-NFELQPKLKQVFGKGLIKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRD--------VVRPY-QTMSNPMSKL--TVLNSMHSHFILADNGTTGKYGAEVKLRRQLE-KHISLQKINTRCLPFFSLDSRLFYSFWGSCQLDSVGIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHK-YSEEGGLINESLRDQLLVTIQKTFTYTRTQAQHLFIILMECMKKKELITVFRMGSEGHQDIDLAILTALLKGANASAP-------------DQLSLALAWNRVDIARSQIFIYGQQWP--VGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNTLYHLVRDVKKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDIPLRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASEN-DMVDD-ISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKN-SGLKVILGILLPPSILSLEFKNKDDMPYMSQAQEIHLQEKEAEEPEKPTKEKEEEDMELTAMLGRNNGESSRKK--DEEEVQSKHRLIPLGR--------KIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRLQ-DQPFRSDGRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKMMIDMMYFVIIMLVVLMSFGVARQAILFPNEEPSWKLAKNIFYMPYWMIYGEVFADQIDPPCGQNETREDGKIIQLPPCKT-GAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHERPVLPPPLIIFSHMTMIFQHLCCRWRK 1192

The following BLAST results are available for this feature:

BLAST of TCONS_00072028-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00072028-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TRPM3	3.595e-107	28.41	Transient receptor potential cation channel subfam...	[more]

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TCONS_00072028-protein (polypeptide) - C. hemisphaerica