TCONS_00072017-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072017-protein
Unique NameTCONS_00072017-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length566

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072017-protein ID=TCONS_00072017-protein|Name=TCONS_00072017-protein|organism=Clytia hemisphaerica|type=polypeptide|length=566bp
SVKKTNMAVEISSTTVGKGANKHCCWGICKHDSRYPDKLPPGTFFISFPK
VGKLKDSQTEWQKSKEREKTEKAKRWIHACGRKGFTISNITKSTYICSKH
FIGGNGPTEENPDPIKATLSEAEVEKKLSGKRKAPKQREPLPSKPVAVKR
KKKSNIEVTFECNTANEPLDSTEAGPSTSSNQNEENQKQTLISVDTYSTD
VVNPPDTVDKSTQTEADKLAKSTQTEADKLAISGRIEIVTLKNEIAVLKS
RIESSNDHSECNPMSMNVILKSEEKTKYFIGLSRKHFWSLYNFLGDAKFN
LTYWNSSYSRNSSTRKFSIPIPNQLFITLLRLRRGFNLYTMAHFYSVSET
TISTIFNTWIMFLFHHFKSLGNDILFPERQVFKKTLPKVFRPFKNVRASI
DCTELKCEAPRDYKRQGNMYSNYKSHCTFKCLIAVNPNGAACFVSDLFEG
SINDVDIFQKCGILQQVNFQDSFLVDKGFTVQHLLLPKQASIFIPPFLGK
RERFTKEEVLLCKRIAKARIHVERFNERLKRFRLLDGIIQLSLTPIASQL
VFVGSMLVNFQHFLCK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044717XLOC_044717Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072017TCONS_00072017Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027806HARBI1_dom
IPR027805Transposase_HTH_dom
IPR006612Znf_C2CH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 400..559
e-value: 3.9E-38
score: 130.5
IPR027805Transposase, Helix-turn-helix domainPFAMPF13613HTH_Tnp_4coord: 320..368
e-value: 3.3E-9
score: 36.2
IPR006612Zinc finger, C2CH-typePFAMPF05485THAPcoord: 24..103
e-value: 5.6E-6
score: 27.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..220
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 22..103

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072017-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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