Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00071899-protein ID=TCONS_00071899-protein|Name=TCONS_00071899-protein|organism=Clytia hemisphaerica|type=polypeptide|length=367bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term Definition
GO:0006813 potassium ion transport GO:0051260 protein homooligomerization GO:0055085 transmembrane transport GO:0006811 ion transport
Vocabulary: Molecular Function
Term Definition
GO:0005249 voltage-gated potassium channel activity GO:0005216 ion channel activity
Vocabulary: Cellular Component
Term Definition
GO:0008076 voltage-gated potassium channel complex GO:0016020 membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0006811 ion transport
biological_process
GO:0006813 potassium ion transport
biological_process
GO:0051260 protein homooligomerization
biological_process
GO:0055085 transmembrane transport
cellular_component
GO:0016020 membrane
cellular_component
GO:0008076 voltage-gated potassium channel complex
molecular_function
GO:0005216 ion channel activity
molecular_function
GO:0005249 voltage-gated potassium channel activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 Score = 43.61 Score = 34.2 Score = 23.11 Score = 25.92 Score = 21.76 Score = 22.68 Score = 41.95 Score = 24.89 Expect = 1.2E-17 / Score = 64.0 Expect = 3.5E-15 / Score = 55.4 Expect = 3.7E-16 / Score = 58.1 Expect = 6.7E-13 / Score = 48.0 Score = Expect = 1.1E-21 / Score = 77.1 Score = Sequence PR00169 PF02214 G3DSA:1.20.120.350 G3DSA:1.10.287.70 G3DSA:3.30.710.10 SSF81324 PF00520 SSF54695
IPR Term IPR Description Source Source Term Source Description Alignment
IPR028325 Voltage-gated potassium channel PRINTS PR00169 KCHANNEL coord: 169..192 IPR003131 Potassium channel tetramerisation-type BTB domain PFAM PF02214 BTB_2 coord: 1..87 None No IPR available GENE3D 1.20.120.350 coord: 135..258 None No IPR available GENE3D 1.10.287.70 coord: 259..356 None No IPR available GENE3D 3.30.710.10 coord: 1..110 None No IPR available SUPERFAMILY 81324 Voltage-gated potassium channels coord: 133..342 IPR005821 Ion transport domain PFAM PF00520 Ion_trans coord: 137..340 IPR011333 SKP1/BTB/POZ domain SUPERFAMILY 54695 POZ domain coord: 1..99
Blast
BLAST of TCONS_00071899-protein vs. Swiss-Prot (Human)
Match:
KCNA2 (Potassium voltage-gated channel subfamily A member 2 OS=Homo sapiens GN=KCNA2 PE=1 SV=2)
HSP 1 Score: 155.221 bits (391), Expect = 9.682e-43
Identity = 112/381 (29.40%), Postives = 189/381 (49.61%), Query Frame = 0
Query: 1 VSGKIFETNQSTLDRFTDTLLSSDSQDRKRYYCEKQKQFFFNRDRNKFEAILFFYQSCGKLFLPPLCSLEEFIEECEFFRLPRAAIDLLKLLEGAELMQNVKNASRSLRPPRANTYLNRIRNMLDYPNSSIPAILYFTMYCLLIVVSIIRYCIETLP----------GSTIDQNLY---------WTYF-------EIAGSGFFLLDFLMRLLLSRSPKKFLSEVFTVIDIIT-IPSYTTINL-LVEIEHYSSLCRFLKALQFLRIARLLR------FGKMSRRVSIVYAIVKDSLQDLRYFFVCLLVIVTTSGSIVYSMEKDSNK-LMTNIPESMWWSLQAYLTIGYGDVIPQTVVGKTFSAFYMAVGILTLMLPMLSLI 346
+SG FET TL +F +TLL D + R RY+ + ++FF+R+R F+AIL++YQS G+L P L+ F EE F+ L A+++ + EG +K R L N + ++ + +YP SS PA + + ++I++SI+ +C+ETLP GS + + Y T F E +F +FL+R S F + + +IDI+ IP + T+ L E + + +L LR+ RL+R + S+ + I+ +K S+++L L + V S VY E D + +IP++ WW++ + T+GYGD++P T+ GK + G+LT+ LP+ ++
Sbjct: 39 ISGLRFETQLKTLAQFPETLLG-DPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGY-----IKEEERPL---PENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIV 410
The following BLAST results are available for this feature:
BLAST of TCONS_00071899-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
V S G K I F E T N Q S T L D R F T D T L L S S D S Q D R K R Y Y C E K Q K Q F F F N R D R N K F E A I L F F Y Q S C G K L F L P P L C S L E E F I E E C E F F R L P R A A I D L L K L L E G A E L M Q N V K N A S R S L R P P R A N T Y L N R I R N M L D Y P N S S I P A I L Y F T M Y C L L I V V S I I R Y C I E T L P G S T I D Q N L Y W T Y F E I A G S G F F L L D F L M R L L L S R S P K K F L S E V F T V I D I I T I P S Y T T I N L L V E I E H Y S S L C R F L K A L Q F L R I A R L L R F G K M S R R V S I V Y A I V K D S L Q D L R Y F F V C L L V I V T T S G S I V Y S M E K D S N K L M T N I P E S M W W S L Q A Y L T I G Y G D V I P Q T V V G K T F S A F Y M A V G I L T L M L P M L S L I L K L V K C T K E I N L D E K I Y V D A E 50 100 150 200 250 300 350 Expect = 9.68e-43 / Id = 29.40 Sequence KCNA2
Match Name E-value Identity Description
KCNA2 9.682e-43 29.40 Potassium voltage-gated channel subfamily A member... [more]
back to top
