Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00071883-protein ID=TCONS_00071883-protein|Name=TCONS_00071883-protein|organism=Clytia hemisphaerica|type=polypeptide|length=285bp
MKVLLAFVVTIVLANAAKQCKVDKKYRVDCGHSLIKKSECERKHCCWSPL
EENSKEPWCFFPGRAVNFGFPNSFFGTEASEGTEQPEETEGPGGTQEQET
PQGPFVTEGPEKTEEPEETEKPQATKRPFKTEAPEGTETPDETEGPEGTG
GPVGTEEPEGTEGPVETDRPDGTEEPIETERPQITKAGKMGQVRICEDDS
RIISCKNEGKLQILEGSYYGRKISKGCKKWYHYHWNTSCGEASSKRIMSL
KCDGRKSCEISCDNESFEDPCWGTKKYCLVKYKCA Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030246 | carbohydrate binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0030246 |
carbohydrate binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000519 | P-type trefoil domain | SMART | SM00018 | P_2 | coord: 18..66
e-value: 1.3E-5
score: 34.6 |
| IPR000519 | P-type trefoil domain | PFAM | PF00088 | Trefoil | coord: 20..62
e-value: 1.7E-12
score: 46.9 |
| IPR000519 | P-type trefoil domain | PROSITE | PS51448 | P_TREFOIL_2 | coord: 18..63
score: 14.893 |
| IPR000519 | P-type trefoil domain | CDD | cd00111 | Trefoil | coord: 19..62
e-value: 1.39792E-9
score: 51.5758 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PFAM | PF02140 | Gal_Lectin | coord: 203..284
e-value: 2.4E-13
score: 50.2 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PROSITE | PS50228 | SUEL_LECTIN | coord: 195..285
score: 11.463 |
| None | No IPR available | GENE3D | 4.10.110.10 | | coord: 13..67
e-value: 5.4E-13
score: 48.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 72..177 |
| None | No IPR available | SUPERFAMILY | 57492 | Trefoil | coord: 14..63 |
Blast
The following BLAST results are available for this feature:
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