Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00071763-protein ID=TCONS_00071763-protein|Name=TCONS_00071763-protein|organism=Clytia hemisphaerica|type=polypeptide|length=550bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term Definition
GO:0070588 calcium ion transmembrane transport
Vocabulary: Molecular Function
Term Definition
GO:0005245 voltage-gated calcium channel activity GO:0005515 protein binding
Vocabulary: Cellular Component
Term Definition
GO:0005891 voltage-gated calcium channel complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0070588 calcium ion transmembrane transport
cellular_component
GO:0005891 voltage-gated calcium channel complex
molecular_function
GO:0005515 protein binding
molecular_function
GO:0005245 voltage-gated calcium channel activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 400 450 500 550 Score = 70.78 Score = 100.0 Score = 68.93 Score = 83.73 Score = 66.47 Score = 73.35 Score = 81.31 Score = 77.57 Score = 56.86 Expect = 2.6E-15 / Score = 66.8 Expect = 3.8E-34 / Score = 117.9 Expect = 5.7E-21 / Score = 74.6 Expect = 7.3E-39 / Score = 132.7 Score = Score = Expect = 1.27688E-34 / Score = 123.542 Score = 11.124 Score = Score = Score = Sequence PR01626 SM00072 PF00625 G3DSA:2.30.30.40 G3DSA:3.40.50.300 mobidb-lite mobidb-lite cd11863 PS50002 SSF50044 SSF52540
IPR Term IPR Description Source Source Term Source Description Alignment
IPR000584 Voltage-dependent calcium channel, L-type, beta subunit PRINTS PR01626 LCACHANNELB coord: 360..374 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SMART SM00072 gk_7 coord: 320..502 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PFAM PF00625 Guanylate_kin coord: 320..501 None No IPR available GENE3D 2.30.30.40 coord: 143..308 None No IPR available GENE3D 3.40.50.300 coord: 309..515 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 214..302 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..71 None No IPR available CDD cd11863 SH3_CACNB coord: 161..222 IPR001452 SH3 domain PROSITE PS50002 SH3 coord: 158..219 IPR001452 SH3 domain SUPERFAMILY 50044 SH3-domain coord: 147..247 IPR027417 P-loop containing nucleoside triphosphate hydrolase SUPERFAMILY 52540 P-loop containing nucleoside triphosphate hydrolases coord: 319..504
Blast
BLAST of TCONS_00071763-protein vs. Swiss-Prot (Human)
Match:
CACB2 (Voltage-dependent L-type calcium channel subunit beta-2 OS=Homo sapiens GN=CACNB2 PE=1 SV=3)
HSP 1 Score: 412.535 bits (1059), Expect = 3.298e-137
Identity = 217/397 (54.66%), Postives = 279/397 (70.28%), Query Frame = 0
Query: 123 DGRKTSGTSSEYGDGEDLEALRILALEKLQA----ARTRPVAFAVRANYGYNGSEDDDSPVHGMAVSFEKDDCLHIKDKFNKDWWIGRVVKEGHNIGFVPSPDKLESIR----QSGVSGKLKMRQSSTSSNMNLHDD-PQNQRS-PLGEAGGNNS--FDDETVNSPVRNVSTESNNTNNNNTTNSLNAQKGKKGIFKKNEQLHPYYVIPSMRPIIFVGPSLKGYEVTDMMQKALFDYLKHRFSERIIFTRVNADISLAKRSNLNNQNRQPNFPKKSNGQAGLAEVQEEVNRIFELCRSSQLVVLDCDTINNPSQVIKTSLAPIIVAIKIASPKVLTRLIKSRGKNQVKHLNIQMIAADKLSQCNEEMFDVVLDENQLEDACEHLGEFLEAYWRAAVP 507
D + + S+ ED EA+R A + QA A+T+PVAFAVR N Y+ + +DD PV GMA+SFE D LH+K+KFN DWWIGR+VKEG IGF+PSP KLE++R Q GK +S +S+ +L D P +++S P A ++ D E + P + S + + N+ S ++++ + FKK E PY V+PSMRP++ VGPSLKGYEVTDMMQKALFD+LKHRF RI TRV ADISLAKRS LNN ++ ++SN ++ LAEVQ E+ RIFEL R+ QLVVLD DTIN+P+Q+ KTSLAPIIV +KI+SPKVL RLIKSRGK+Q KHLN+QM+AADKL+QC E+FDV+LDENQLEDACEHL ++LEAYW+A P
Sbjct: 75 DSYTSRPSDSDVSLEEDREAVRREAERQAQAQLEKAKTKPVAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKLENMRLQHEQRAKQGKFYSSKSGGNSSSSLGDIVPSSRKSTPPSSAIDIDATGLDAEENDIPANHRSPKPSA----NSVTSPHSKEKRMPFFKKTEHTPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKHAII-ERSNTRSSLAEVQSEIERIFELARTLQLVVLDADTINHPAQLSKTSLAPIIVYVKISSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPPELFDVILDENQLEDACEHLADYLEAYWKATHP 466
The following BLAST results are available for this feature:
BLAST of TCONS_00071763-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M M H G S Q T E P A I S S M T S E R N H K N L S H G S R T S I N S Q R S T N K K V N S H V S F D E S T A A P S S K K P G A L S A A G G K K S V D D N F S S S V L Q T V F A L R W Q K K A A Q K K K K P D D F Q Q M Y M H S M S G A L G S I I G D E F D G R K T S G T S S E Y G D G E D L E A L R I L A L E K L Q A A R T R P V A F A V R A N Y G Y N G S E D D D S P V H G M A V S F E K D D C L H I K D K F N K D W W I G R V V K E G H N I G F V P S P D K L E S I R Q S G V S G K L K M R Q S S T S S N M N L H D D P Q N Q R S P L G E A G G N N S F D D E T V N S P V R N V S T E S N N T N N N N T T N S L N A Q K G K K G I F K K N E Q L H P Y Y V I P S M R P I I F V G P S L K G Y E V T D M M Q K A L F D Y L K H R F S E R I I F T R V N A D I S L A K R S N L N N Q N R Q P N F P K K S N G Q A G L A E V Q E E V N R I F E L C R S S Q L V V L D C D T I N N P S Q V I K T S L A P I I V A I K I A S P K V L T R L I K S R G K N Q V K H L N I Q M I A A D K L S Q C N E E M F D V V L D E N Q L E D A C E H L G E F L E A Y W R A A V P G A Q E G L I S Q E N G G F V N Q G G P N G A G Y N G V D Q Y G T P Q R N L R T A Q V 50 100 150 200 250 300 350 400 450 500 550 Expect = 3.30e-137 / Id = 54.66 Sequence CACB2
Match Name E-value Identity Description
CACB2 3.298e-137 54.66 Voltage-dependent L-type calcium channel subunit b... [more]
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