TCONS_00071682-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071682-protein
Unique NameTCONS_00071682-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length526

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071682-protein ID=TCONS_00071682-protein|Name=TCONS_00071682-protein|organism=Clytia hemisphaerica|type=polypeptide|length=526bp
MAQIGHRALKNVLRTVKPNLLSRTYSSGAPTAKLLINGEFIDSKTDNWIP
VTNPATNEVVSMCPETTPQEMKAAADSASLAFETWKDSSILARQSIMFKY
QQKIKDNMDILAKSITLENGKTFSDAEGELLRGLQVVEHACSITSLQLGE
TMPGISKDMDTHSYRVPLGVCSGITPFNFPAMIPLWMFPMALVCGNTFIM
KPSEQDPGAAMLLCEMAMDCGIPPGVLNVIHGTKPAVDFLCTDPSIRAIS
FVGSDHAGQYIYETGSEHGKRVQSNMGAKNHGIVLSDANKESSLNQLVGA
AFGAAGQRCMALSTAIFVGEAQKWIPDLVERANKLVVNAGHEPNTDVGPM
ITPAAKERCERLIQSGIDRGANCILDGRGHVVPGYENGNFVGPTILTNVT
PDMECYTEEIFGPVLIILNADNLDDAIEIINNNKYGNGTAIFTNSGSAAR
KFTQEVDVGQIGVNVPIPVPLPMFSFTGSRGSFRGDLNFYGKAGVQFYSQ
WKTVTSLWREDDATDKKAQVSFPRMG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044527XLOC_044527Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071682TCONS_00071682Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015590Aldehyde_DH_dom
IPR010061MeMal-semiAld_DH
IPR016162Ald_DH_N
IPR016160Ald_DH_CS_CYS
IPR016161Ald_DH/histidinol_DH
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0004491methylmalonate-semialdehyde dehydrogenase (acylating) activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0004491 methylmalonate-semialdehyde dehydrogenase (acylating) activity
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015590Aldehyde dehydrogenase domainPFAMPF00171Aldedhcoord: 41..504
e-value: 2.1E-131
score: 438.6
NoneNo IPR availableGENE3D3.40.309.10coord: 291..486
e-value: 6.2E-60
score: 201.9
IPR010061Methylmalonate-semialdehyde dehydrogenaseTIGRFAMTIGR01722TIGR01722coord: 33..508
e-value: 1.6E-228
score: 757.1
IPR010061Methylmalonate-semialdehyde dehydrogenaseCDDcd07085ALDH_F6_MMSDHcoord: 33..508
e-value: 0.0
score: 873.765
IPR016162Aldehyde dehydrogenase N-terminal domainGENE3D3.40.605.10coord: 20..290
e-value: 9.6E-80
score: 267.3
IPR016160Aldehyde dehydrogenase, cysteine active sitePROSITEPS00070ALDEHYDE_DEHYDR_CYScoord: 302..313
IPR016161Aldehyde/histidinol dehydrogenaseSUPERFAMILY53720ALDH-likecoord: 26..506

Blast
[Close]
BLAST of TCONS_00071682-protein vs. Swiss-Prot (Human)
Match: MMSA (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Homo sapiens GN=ALDH6A1 PE=1 SV=2)

HSP 1 Score: 720.309 bits (1858), Expect = 0.000e+0
Identity = 329/497 (66.20%), Postives = 398/497 (80.08%), Query Frame = 0 
Query:   30 PTAKLLINGEFIDSKTDNWIPVTNPATNEVVSMCPETTPQEMKAAADSASLAFETWKDSSILARQSIMFKYQQKIKDNMDILAKSITLENGKTFSDAEGELLRGLQVVEHACSITSLQLGETMPGISKDMDTHSYRVPLGVCSGITPFNFPAMIPLWMFPMALVCGNTFIMKPSEQDPGAAMLLCEMAMDCGIPPGVLNVIHGTKPAVDFLCTDPSIRAISFVGSDHAGQYIYETGSEHGKRVQSNMGAKNHGIVLSDANKESSLNQLVGAAFGAAGQRCMALSTAIFVGEAQKWIPDLVERANKLVVNAGHEPNTDVGPMITPAAKERCERLIQSGIDRGANCILDGRGHVVPGYENGNFVGPTILTNVTPDMECYTEEIFGPVLIILNADNLDDAIEIINNNKYGNGTAIFTNSGSAARKFTQEVDVGQIGVNVPIPVPLPMFSFTGSRGSFRGDLNFYGKAGVQFYSQWKTVTSLWREDDATDKKAQVSFPRMG 526
            PT KL I G+F++SK+D WI + NPATNEV+   P+ T  EM AA  S   AF  W D+S+L+RQ ++ +YQQ IK+N+  +AK ITLE GKT +DAEG++ RGLQVVEHACS+TSL +GETMP I+KDMD +SYR+PLGVC+GI PFNFPAMIPLWMFPMA+VCGNTF+MKPSE+ PGA MLL ++  D G P G LN+IHG   AV+F+C  P I+AISFVGS+ AG+YI+E GS HGKRVQ+NMGAKNHG+V+ DANKE++LNQLVGAAFGAAGQRCMALSTA+ VGEA+KW+P+LVE A  L VNAG +P  D+GP+ITP AKER   LI SG   GA+ +LDGR   V GYENGNFVGPTI++NV P+M CY EEIFGPVL++L  + LD+AI+I+NNN YGNGTAIFT +G+ ARK+   VDVGQ+GVNVPIPVPLPMFSFTGSR SFRGD NFYGK G+QFY+Q KT+TS W+E+DAT     V  P MG
Sbjct:   38 PTVKLFIGGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAIASCKRAFPAWADTSVLSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMMGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNKAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPELVEHAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETETLDEAIQIVNNNPYGNGTAIFTTNGATARKYAHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSPAVVMPTMG 534
The following BLAST results are available for this feature:
BLAST of TCONS_00071682-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMSA0.000e+066.20Methylmalonate-semialdehyde dehydrogenase [acylati... [more]
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