TCONS_00071535-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071535-protein
Unique NameTCONS_00071535-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length170

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071535-protein ID=TCONS_00071535-protein|Name=TCONS_00071535-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
EALCQQEVDVGFILDSSGSLRNEYTKEKDFLKAMAAQFDIGKSAQVGVIT
FSYYTELSIKMNQYNDINDLSKAVDDIPLMGSTTRIDKALRQAQSDMFAI
KNGGRFGVNKVLILLTDGSQTQDVGAEDPAVIAGEIRKQGINMMTVGIGP
GVNSTELARIAGGKKNMYQA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044436XLOC_044436Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071535TCONS_00071535Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00453VWFADOMAINcoord: 45..59
score: 20.0
coord: 111..119
score: 51.92
coord: 8..25
score: 32.8
NoneNo IPR availableCDDcd01450vWFA_subfamily_ECMcoord: 8..164
e-value: 2.15004E-33
score: 116.622
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 7..170
e-value: 2.8E-21
score: 86.7
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 5..170
e-value: 6.3E-31
score: 107.2
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 9..166
e-value: 4.4E-31
score: 108.4
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 9..170
score: 24.852
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 3..169

Blast
[Close]
BLAST of TCONS_00071535-protein vs. Swiss-Prot (Human)
Match: CO6A6 (Collagen alpha-6(VI) chain OS=Homo sapiens GN=COL6A6 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.544e-19
Identity = 57/164 (34.76%), Postives = 98/164 (59.76%), Query Frame = 0 
Query:    1 EALCQQEVDVGFILDSSGSLRNE-YTKEKDFLKAMAAQFDIGK-SAQVGVITFSYYTELSIKMNQYNDINDLSKAVDDIPLMGSTTRIDKALRQAQSDMFAIKNGGRFGVNKVLILLTDGSQTQDVGAEDPAVIAGEIRKQGINMMTVGIGPGVNSTELARIAG 162
            EA  + + D+ F++DSSGS+  E ++K K F+K + ++  IG    Q+GV+ FS   +   ++N++   +D+S A+D +  +G TT    AL    S  F+   G R  + K LIL+TDG + QD+  ++PAV+   +R++G+ + +VG+  G N T+L  I+G
Sbjct:  614 EACKEMKADIMFLVDSSGSIGPENFSKMKTFMKNLVSKSQIGPDRVQIGVVQFSDINKEEFQLNRFMSQSDISNAIDQMAHIGQTTLTGSALSFV-SQYFSPTKGARPNIRKFLILITDG-EAQDI-VKEPAVV---LRQEGVIIYSVGVF-GSNVTQLEEISG 770
The following BLAST results are available for this feature:
BLAST of TCONS_00071535-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CO6A61.544e-1934.76Collagen alpha-6(VI) chain OS=Homo sapiens GN=COL6... [more]
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