TCONS_00071424-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071424-protein
Unique NameTCONS_00071424-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071424-protein ID=TCONS_00071424-protein|Name=TCONS_00071424-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
MGKGQSKQTFEENQSRVDGGIGIECENEMEESIRDVKAEEYVIKTQDESI
SYIVYNIQNETKIVPESTMDANNIVVEEVDYSLDNNKTLPIVFHWGYGGK
EVFLSGSFYEWKKRVPMINSGDEYTTTVDLPSGTHEFKYIVDGHWQHDPN
QNTVNDHFAGRNNILTVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044367XLOC_044367Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071424TCONS_00071424Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032640AMPK1_CBM
IPR014756Ig_E-set
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 86..168
e-value: 5.8E-24
score: 83.5
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 90..168
e-value: 4.9E-28
score: 97.1
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 90..167
e-value: 2.14025E-29
score: 103.833
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 87..167

Blast
[Close]
BLAST of TCONS_00071424-protein vs. Swiss-Prot (Human)
Match: AAKB2 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 6.293e-21
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 0 
Query:   90 PIVFHWGYGGKEVFLSGSFYEWKKRVPMINSGDEYTTTVDLPSGTHEFKYIVDGHWQHDPNQNTVNDHFAGRNNILTV 167
            P V  W  GGKEVF+SGSF  W  ++P+I S +++   +DLP G H++K+ VDG W HDP++  V       NN++ V
Sbjct:   78 PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHV 155
The following BLAST results are available for this feature:
BLAST of TCONS_00071424-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AAKB26.293e-2143.595'-AMP-activated protein kinase subunit beta-2 OS=... [more]
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