TCONS_00071059-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00071059-protein
Unique Name	TCONS_00071059-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	985

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00071059-protein ID=TCONS_00071059-protein|Name=TCONS_00071059-protein|organism=Clytia hemisphaerica|type=polypeptide|length=985bp
MENNLLEEEGEDYLTQYDVELYLKKNPQFAKQFVYTYLKNNLDVADEFFQ
AWYDNMIGLSLKRVSRRDRGAPPHDRNHVKSNFNTNPVDEPQCIMGDIET
EPRDHKSYNNNVLPNMKHAYLENNANRRRSDPVNNDVKKLCYGSDECLDT
IEEDLITRTSRSNSVVLPQETRYRTISMDENNNSLQKAIELLQLPAISTD
TQQKPHLRKAQSAPTYKKNLSNLIRSSVYSGSGVSKHINVENHTGLRDSN
ESHYLVEIIKDISKDMSLTKVCFKILVNLGFLLNTEKASIFLVHMDGENG
FLKLLLNDVSIAKGVRKESLSSSVSKQPQSIPIGSGIVGHVAENGQSLIV
NDISKFSEYHPIFDSWWTKNTRNALLQPVKNSEGKTIAVIVSSNNKSGEF
VDEDKQIGASFLSYCGISITNALIFELTKEEFERNKMLLEFSHDIFEEQS
SLTNAIQKILNKALEMFNCKRASLMLLDDPKEVEERQVFSKLFQVTSEID
KKEKRFSKFQRDSMVFSSNFDPFSDVVADTKTLKSKNQKKMILSSTPVSS
VPAGILCEDGLISIPVRNNSSQIIGVLKLYDREDVSSTNSLSANEEQLLE
AFAIFAGLGINNCIMYDNIVKGQAHQKVALEALSYHTAARQTDVDKLKFA
SIPSCSKFHLTSFTFDDFSLLDHEMLAAAIRMFMEFGFLKKFQIDYEVLC
RFLITVKNNYRRVIYHNWRHAFNVTQSMFAMLTTGKMSEQLSSSECLALL
VGCLCHDLDHRGTNNEFQMKTDSPLQKLYGTSTMEQHHFNCAVTILNSEG
NNIFAHLQSQEYRKVMKLLKHAILATDLSNYIRQRDKFSNAVETKSLDTS
LSENRAMLRSMLMTASDLSGITKPWDIQKRVVHLVTSEFFHQGDIERDQL
HVQPKQMMDRNYILQLPKLQVNFFQFMGIPVYKVLSDYNSLLSPFLEGAK
SNKETWFEMNAEIEKGHVHPDIEPVLHPVRQEEIP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044146	XLOC_044146	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00071059	TCONS_00071059	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023088	PDEase
IPR003018	GAF
IPR003607	HD/PDEase_dom
IPR029016	GAF_dom-like
IPR002073	PDEase_catalytic_dom
IPR023174	PDEase_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0008081	phosphoric diester hydrolase activity
GO:0005515	protein binding
GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity
molecular_function	GO:0008081	phosphoric diester hydrolase activity
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023088	3'5'-cyclic nucleotide phosphodiesterase	PRINTS	PR00387	PDIESTERASE1	coord: 863..876 score: 56.29 coord: 880..896 score: 48.24 coord: 742..755 score: 29.29 coord: 782..798 score: 36.59 coord: 711..724 score: 59.14 coord: 756..771 score: 58.62
IPR003018	GAF domain	SMART	SM00065	gaf_1	coord: 451..620 e-value: 0.0031 score: 24.2 coord: 267..429 e-value: 8.1E-10 score: 48.6
IPR003018	GAF domain	PFAM	PF13185	GAF_2	coord: 296..419 e-value: 4.8E-7 score: 30.1
IPR003607	HD/PDEase domain	SMART	SM00471	hd_13	coord: 713..881 e-value: 4.7E-8 score: 42.8
IPR029016	GAF domain-like	GENE3D	3.30.450.40		coord: 549..618 e-value: 1.1E-6 score: 28.3
IPR029016	GAF domain-like	GENE3D	3.30.450.40		coord: 437..515 e-value: 0.0014 score: 17.7
IPR029016	GAF domain-like	GENE3D	3.30.450.40		coord: 246..436 e-value: 1.1E-19 score: 70.3
IPR029016	GAF domain-like	SUPERFAMILY	55781	GAF domain-like	coord: 251..445
IPR029016	GAF domain-like	SUPERFAMILY	55781	GAF domain-like	coord: 432..637
IPR002073	3'5'-cyclic nucleotide phosphodiesterase, catalytic domain	GENE3D	1.10.1300.10		coord: 619..969 e-value: 7.8E-106 score: 353.3
IPR002073	3'5'-cyclic nucleotide phosphodiesterase, catalytic domain	PFAM	PF00233	PDEase_I	coord: 715..947 e-value: 5.7E-75 score: 252.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..92
None	No IPR available	CDD	cd00077	HDc	coord: 715..890 e-value: 2.04372E-9 score: 55.8085
None	No IPR available	SUPERFAMILY	109604	HD-domain/PDEase-like	coord: 654..969
IPR023174	3'5'-cyclic nucleotide phosphodiesterase, conserved site	PROSITE	PS00126	PDEASE_I	coord: 756..767

Blast

[Close]

BLAST of TCONS_00071059-protein vs. Swiss-Prot (Human)
Match: PDE11 (Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A OS=Homo sapiens GN=PDE11A PE=1 SV=2)

HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0
Identity = 309/778 (39.72%), Postives = 468/778 (60.15%), Query Frame = 0

Query:  199 TDTQQKPHLRKAQS-APTYKKNLSNLIRSSVYSGSGVSKHINVENHTGLRDSNESHYLVEIIKDISKDMSLTKVCFKILVNLGFLLNTEKASIFLVHMDGENGFLKLLLNDV-SIAKGVRKESLSSSVSKQPQSIPIGSGIVGHVAENGQSLIVNDISKFSEYHPIFDSWWTKNTRNALLQPVKNSEGKTIAVIVSSNN--KSGEFVDEDKQIGASFLSYCGISITNALIFELTKEEFERNKMLLEFSHDIFEEQSSLTNAIQKILNKALEMFNCKRASLMLLDDPKEVEERQV-FSKLFQVTSEIDKKEKRFSKFQRDSMVFSSNFD-----PFSDVVADT----KTLKSKNQKKMILSSTPVSSVPA-GILCEDGLISIPVRNNSSQIIGVLKLYDREDVSSTNSLSANEEQLLEAFAIFAGLGINNCIMYDNIVKGQAHQKVALEALSYHTAARQTDVDKLKFASIPSCSKFHLTSFTFDDFSLLDHEMLAAAIRMFMEFGFLKKFQIDYEVLCRFLITVKNNYRRVIYHNWRHAFNVTQSMFAMLTTGKMSEQLSSSECLALLVGCLCHDLDHRGTNNEFQMKTDSPLQKLYGTS-TMEQHHFNCAVTILNSEGNNIFAHLQSQEYRKVMKLLKHAILATDLSNYIRQRDKFSNAVETKSLDTSLSENRAMLRSMLMTASDLSGITKPWDIQKRVVHLVTSEFFHQGDIERDQLHVQPKQMMDRNYILQLPKLQVNFFQFMGIPVYKVLSDYNSLLSPFLEGAKSNKETWFEMN 960
            +  +++  LRKA S  PT    LS L+ S V         I+ + H  L+  NE  + +E++KDIS D+ LT + +KIL+ +  +++ ++ S+FLV  +G     K L++    +  G      SS+ +     +P G GI+G+V E+G+++ + D  +   ++   D      T++ L  P+++S+G+ I V  + N   +   F ++D+++   +L +CGI+I+NA +F  +++E+ER++ LLE  +D+FEEQ+ L   ++KI+++A  +  C+R S++LL+D   +E   V F+K F++ S     +   S   ++SM  SS  D       +++VA T        +    +    +  +S      +LC      +P+ N++ QIIGV ++ +R D          +++L EAF IF GLGINN IMYD + K  A Q VAL+ LSYH    + +VDK K A+IP  S+  +    FDDFSL    M+ AA+RMFME G ++KF+IDYE LCR+L+TV+ NYR V+YHNWRHAFNV Q MFAMLTT    + L+  E LA++VGCLCHDLDHRGTNN FQ K+ S L +LYGTS T+E HHFN AV IL SEG+NIFA+L S+EY  +M+LLK +ILATDL+ Y  +R +F   V     D ++  +R + RSMLMTA DL  +TKPW+I ++V  LVTSEFF QGD ER +L + P  + DRN   +LP+LQ+ +   + +P+Y+ L   N  L P L+   +N+  W E++
Sbjct:  150 SSVRRRALLRKASSLPPTTAHILSALLESRVNLPRYPPTAIDYKCH--LKKHNERQFFLELVKDISNDLDLTSLSYKILIFVCLMVDADRCSLFLV--EGAAAGKKTLVSKFFDVHAGTPLLPCSSTENSNEVQVPWGKGIIGYVGEHGETVNIPDAYQDRRFNDEIDKLTGYKTKSLLCMPIRSSDGEIIGVAQAINKIPEGAPFTEDDEKVMQMYLPFCGIAISNAQLFAASRKEYERSRALLEVVNDLFEEQTDLEKIVKKIMHRAQTLLKCERCSVLLLED---IESPVVKFTKSFELMSPKCSADAENSF--KESMEKSSYSDWLINNSIAELVASTGLPVNISDAYQDPRFDAEADQISGFHIRSVLC------VPIWNSNHQIIGVAQVLNRLD---GKPFDDADQRLFEAFVIFCGLGINNTIMYDQVKKSWAKQSVALDVLSYHATCSKAEVDKFKAANIPLVSELAIDDIHFDDFSLDVDAMITAALRMFMELGMVQKFKIDYETLCRWLLTVRKNYRMVLYHNWRHAFNVCQLMFAMLTTAGFQDILTEVEILAVIVGCLCHDLDHRGTNNAFQAKSGSALAQLYGTSATLEHHHFNHAVMILQSEGHNIFANLSSKEYSDLMQLLKQSILATDLTLYFERRTEFFELVSKGEYDWNIKNHRDIFRSMLMTACDLGAVTKPWEISRQVAELVTSEFFEQGDRERLELKLTPSAIFDRNRKDELPRLQLEWIDSICMPLYQALVKVNVKLKPMLDSVATNRSKWEELH 909

The following BLAST results are available for this feature:

BLAST of TCONS_00071059-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00071059-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PDE11	0.000e+0	39.72	Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 1...	[more]

You are here

TCONS_00071059-protein (polypeptide) - C. hemisphaerica