TCONS_00070897-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070897-protein
Unique NameTCONS_00070897-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length395

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070897-protein ID=TCONS_00070897-protein|Name=TCONS_00070897-protein|organism=Clytia hemisphaerica|type=polypeptide|length=395bp
MGFDFAMQYLIFFFTFLGNMPSSAQQSCYMNCNCSGTEVSCDGAPKDILN
GTPPKSNITRLSLINMELENDALLTKFLENLTQLQYLDLSLNQLTEIPKL
DNLATLNNLVLRQNKIENLPKELADIEFKNLTIDLSENPINCNCTTVYIV
EKTQEIKYKGICTQQNIKINELNQTMVDCDPCSINNGGCSLIKTCIAENA
LNVVCICNNGFTGDFCQISPTNPVPCKINNCLNGGVCFHVENTNSTFCEC
VSTDYSGDFCQNKTRNESTRKTTLSLNAITAIIVSLLVLLFVIVFGYWYC
VHLRPKRRRMRESRKKKAKNSFDSQNSIVNYYLQNEGYFHDESTSIPNSP
KEGEENSYPHDPAHNRWLHGRRRCSTILEEKASREGSCMDENEKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044086XLOC_044086Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070897TCONS_00070897Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR032675L_dom-like
IPR013032EGF-like_CS
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 225..261
e-value: 0.18
score: 20.9
coord: 181..217
e-value: 1.6
score: 17.7
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 222..261
score: 17.196
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 178..217
score: 8.498
NoneNo IPR availableGENE3D2.10.25.10coord: 174..218
e-value: 4.7E-5
score: 22.7
NoneNo IPR availableGENE3D1.20.5.900coord: 273..325
e-value: 4.2E-4
score: 19.7
NoneNo IPR availableGENE3D2.10.25.10coord: 219..264
e-value: 8.1E-4
score: 18.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..366
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 181..214
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 224..263
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 28..173
e-value: 2.3E-13
score: 49.2
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 56..155
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 205..216
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 205..216
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 105..126
score: 5.818
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 83..104
score: 9.583

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070897-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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