TCONS_00070890-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070890-protein
Unique NameTCONS_00070890-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070890-protein ID=TCONS_00070890-protein|Name=TCONS_00070890-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MMLNIQTVIDCNNLVCIYRDLIQADLSSTQDLKTFAPTSFFMATWNEVEF
YSNAKSSFQVVLVTNGTSTIAIIKIVDMQIPSWQLLFYPELDVRYAYDQG
TTFKRSRFLQKQTNGPKSGTIQTAPASNAYSNTNLNGRWIINLSIDPDKQ
QGGGSQINATFAPVVDERVKRGSQIAEVGVAGKFVFDKLTLDGNVVTQPG
DNNEISVILSKKDKRFNTMDTNIINWLSTVYAKASGNVSPAKVTIIDYKP
GSLVVEYSVEIPEEVCGTKSRPECIKTVETTVTKEANNITESNIEATLDQ
KRTEFTDLDECSVDSSRGDKLFCDQNAYCYNFPGEGSYACICKDGYEGSG
RVGQCNLIKDTAKKTIGIIAGVIIALLLLIFVFVFVIKREQNERLREKQI
EAERIIPRDMRPRKSMMKPKDRSTRRVLVRAGEFGSDFDVYHRT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044082XLOC_044082Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070890TCONS_00070890Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR013032EGF-like_CS
IPR000742EGF-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 307..356
e-value: 5.4E-4
score: 28.2
NoneNo IPR availableGENE3D1.20.5.100coord: 363..394
e-value: 3.0E-4
score: 19.9
NoneNo IPR availableGENE3D2.10.25.10coord: 291..357
e-value: 4.3E-8
score: 32.6
NoneNo IPR availableCDDcd00054EGF_CAcoord: 307..348
e-value: 1.53131E-5
score: 41.083
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 340..355
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 307..356
score: 12.009

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070890-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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