TCONS_00070833-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070833-protein
Unique Name	TCONS_00070833-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	321

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070833-protein ID=TCONS_00070833-protein|Name=TCONS_00070833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=321bp
MACLLYNPYSNIDYDSFLLEMEQSYVKLKIAEKEEKLRRDREKKTMKPVN
GTAQKDGKYFLVRLEMEVEKINSLINSTEKDSRLAQLPDEASGKIRNAVG
KAHLLLNKRFKQFRELCRDNIENDPDKKETKSSDLQGYWDMMYIQIEDVH
ALFNDIDKLRANNWLVTEDATDGYLKPQDDTKKGSSSTPKGKRKSTGKSP
RTKTKTIDDEKVKREARSRLVAARKQAKLRAQQEATASNGGSPDDGSPDE
GSPDSSINGSLNGSWTADKNEEAANSSLNTSLNSSSNSSSVELLSNGVDS
LDIAAESRPVLKPNIEVNSVA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044064	XLOC_044064	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070833	TCONS_00070833	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005026	SAPAP

Vocabulary: **Biological Process**
Term	Definition
GO:0023052	signaling

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0023052	signaling

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..292
IPR005026	SAPAP family	PFAM	PF03359	GKAP	coord: 41..238 e-value: 7.9E-38 score: 130.8

Blast

[Close]

BLAST of TCONS_00070833-protein vs. Swiss-Prot (Human)
Match: DLGP1 (Disks large-associated protein 1 OS=Homo sapiens GN=DLGAP1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.507e-26
Identity = 65/189 (34.39%), Postives = 109/189 (57.67%), Query Frame = 0

Query:   52 TAQKDGKYFLVRLEMEVEKINSLINSTEKDSRLAQLPDEASGKIRNAVGKAHLLLNKRFKQFRELCRDNIENDPDKKETKSSDLQGYWDMMYIQIEDVHALFNDIDKLRANNWLVTEDATDGYLKPQD--DTKKGSSSTPKGKRKSTGKSPRTKTKTIDDEKVKREARSRLVAARKQAKLRAQQEATAS 238
               +DG +FL  L+ E +++       E++ R   LP++  GKIR AVG A LL+ ++F QFRELC +N+  +   + T S DL G+WDM+ + IE++   F+++ +L+ANNW           K  D  D K+  +  P  K+ + G +P  + ++++  + ++EAR RL+AA++ A +R Q  AT S
Sbjct:  788 VCHRDGHWFLKLLQAERDRMEGWCQQMEREERENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCEENLNPNAHPRPT-SQDLAGFWDMLQLSIENISMKFDELHQLKANNW-----------KQMDPLDKKERRAPPPVPKKPAKGPAPLIRERSLESSQ-RQEARKRLMAAKRAASVR-QNSATES 962

The following BLAST results are available for this feature:

BLAST of TCONS_00070833-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070833-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DLGP1	3.507e-26	34.39	Disks large-associated protein 1 OS=Homo sapiens G...	[more]

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TCONS_00070833-protein (polypeptide) - C. hemisphaerica