TCONS_00070820-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070820-protein
Unique NameTCONS_00070820-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length389

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070820-protein ID=TCONS_00070820-protein|Name=TCONS_00070820-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
MIRFAVVHRAKDGLALSASTDVDSGVELRDSKRYAKILSRKARQFPVRCT
MTVGRFKIYFTTEVGVCFLMICEINLAAVLAFSFVDELKREFTTQYTRGA
VDKAIRPYSFIAFDSFIQKTKTKYNNTRTLYTRIDLTDISEELKNNPPYE
ITEKDLNSSAAGVGGGVIQNSVSNAAKNILKATSNGSATHILPPKFKMDA
MTTSNYVAVMVCLLCGIMNIVRLVPFLSQVDMEDETHWLSISFAFFTSAV
INFLQCYVLYSPIQRRSIANVGCFLTSLISLYYLFDLRNIYQVLFHFSAS
LFMAFNIWKRPILDDYVGAGEDILLLRRTDQESGRYKLENFKDKRIMVMD
RERSLLIASDQNKLNFGFIDFWCTYYDDNTDCLGNLIKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044058XLOC_044058Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070820TCONS_00070820Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010908Longin_dom
IPR011012Longin-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010908Longin domainSMARTSM01270Longin_2coord: 34..116
e-value: 1.8E-18
score: 77.4
IPR010908Longin domainPFAMPF13774Longincoord: 37..114
e-value: 2.6E-15
score: 56.1
IPR010908Longin domainPROSITEPS50859LONGINcoord: 6..117
score: 19.004
NoneNo IPR availableGENE3D3.30.450.50coord: 1..147
e-value: 1.7E-28
score: 98.9
IPR011012Longin-like domainSUPERFAMILY64356SNARE-likecoord: 1..125

Blast
[Close]
BLAST of TCONS_00070820-protein vs. Swiss-Prot (Human)
Match: SC22A (Vesicle-trafficking protein SEC22a OS=Homo sapiens GN=SEC22A PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.553e-65
Identity = 122/316 (38.61%), Postives = 179/316 (56.65%), Query Frame = 0 
Query:    1 MIRFAVVHRAKDGLALSASTDVDSGVELRDSKRYAKILSRKARQFPVRCTMTVGRFKIYFTTEVGVCFLMICEINLAAVLAFSFVDELKREFTTQYTRGAVDKAIRPYSFIAFDSFIQKTKTKYNNTRTLYTRIDLTDISEELKNNPPYEITEKDLNSSAAGVGGGVIQNSVSNAAKNILKATSNGSATHILPPKFKMDAMTTSNYVAVMVCLLCGIMNIVR---LVPFLSQVDMEDETHWLSISFAFFTSAVINFLQCYVLYSPIQRRSIANVGCFLT-SLISL--YYLFDLRNIYQVLFHFSASLFMAFNIWKR 310
            MI  A V R +DGL LSASTD +    +++ ++Y K+LSRK  Q P RCT+  G + I F + +GV ++M+C  N   VLAFSF+DEL++EF T Y     + A+RPY FI FD+FIQ+TK +YNN R+L T+I+L+D+  E+K  PPY+I+  +L S+          N V++A     K     S+ H      +++  T S  V  ++ LLCG +N++R    +  L Q D +D  + +    AFF        QCY+L   +      NV  FLT  LI L   YL++LRN++Q+ FH +   F+   IW R
Sbjct:    3 MILSASVIRVRDGLPLSASTDYEQSTGMQECRKYFKMLSRKLAQLPDRCTLKTGHYNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQTEIKLRPPYQISMCELGSA----------NGVTSAFSVDCKGAGKISSAHQ-----RLEPATLSGIVGFILSLLCGALNLIRGFHAIESLLQSDGDDFNYII----AFFLGTAACLYQCYLL---VYYTGWRNVKSFLTFGLICLCNMYLYELRNLWQLFFHVTVGAFVTLQIWLR 296
The following BLAST results are available for this feature:
BLAST of TCONS_00070820-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SC22A1.553e-6538.61Vesicle-trafficking protein SEC22a OS=Homo sapiens... [more]
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