TCONS_00070729-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070729-protein
Unique Name	TCONS_00070729-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	421

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070729-protein ID=TCONS_00070729-protein|Name=TCONS_00070729-protein|organism=Clytia hemisphaerica|type=polypeptide|length=421bp
MEMEVSIHNTKTNILKENQIGDGQSYYQMKFLFEIRVGNNVIGSCDIYID
NSKGPIAFLDKTGNTFMFMPNTKKINFCAESKESDENNNRMPLEEVTSNE
LTTTDHKVILQSHEERYQVNTNVNDLEPCINKFLTNESDLSTNELEGCHD
EVGENVNHSKVNEFTNEEIDEGSDEFVEQYESNPISNDPEILSGNNDELS
NDKSKCSKPSVDLFFDITRHDNTNETSDHQNYEVGVKIEKLVPGSHALPI
VNDSPLSSLSIENSKKTLEKANENNLVENQTNKFQCQECGKFYSTEKTLK
IHINTIHEENGHFNCEECGKTFATLIYLKRHEKIHGVKLHICEECGKSFT
QRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECP
ECGKSFSHKSSMIHHCLTIHK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044005	XLOC_044005	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070729	TCONS_00070729	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013087	Znf_C2H2_type

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 340..362 e-value: 0.018 score: 24.2 coord: 284..307 e-value: 0.0037 score: 26.5 coord: 313..335 e-value: 7.1E-4 score: 28.9 coord: 397..420 e-value: 0.0033 score: 26.6 coord: 368..391 e-value: 0.01 score: 25.0
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 342..362
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 370..391
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 286..307
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 399..420
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 340..367 score: 15.791
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 313..335 score: 12.341
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 397..421 score: 12.508
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 284..312 score: 10.72
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 368..396 score: 14.274
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 283..335
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 321..377
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 366..420
None	No IPR available	GENE3D	3.30.160.60		coord: 110..295 e-value: 7.1E-4 score: 19.1
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 368..391 e-value: 0.017 score: 15.0
None	No IPR available	GENE3D	2.20.28.10		coord: 349..367 e-value: 1.4E-12 score: 46.8
None	No IPR available	GENE3D	3.30.160.60		coord: 296..322 e-value: 9.1E-14 score: 50.8
None	No IPR available	GENE3D	3.30.160.60		coord: 381..420 e-value: 1.3E-14 score: 53.7
None	No IPR available	GENE3D	2.20.28.10		coord: 323..348 e-value: 3.3E-13 score: 49.2
None	No IPR available	PFAM	PF00096	zf-C2H2	coord: 284..307 e-value: 2.3E-4 score: 21.3 coord: 313..335 e-value: 4.3E-4 score: 20.5 coord: 397..420 e-value: 0.0037 score: 17.6
None	No IPR available	GENE3D	3.30.160.60		coord: 368..380 e-value: 1.4E-8 score: 34.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..205

Blast

[Close]

BLAST of TCONS_00070729-protein vs. Swiss-Prot (Human)
Match: ZN850 (Zinc finger protein 850 OS=Homo sapiens GN=ZNF850 PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.832e-33
Identity = 70/194 (36.08%), Postives = 112/194 (57.73%), Query Frame = 0

Query:  227 SDHQNYEVGVKIEKLVPGSHALPI----VNDSPLSSLSIENSKKTLEKANENNLVENQTNKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            +D + +E    ++   P +H +        D P        S  +    N++  +      + C++CGK ++   TL  H   IH     ++C+ECGK+FA+   L RH++IH G K + C+ECGKSFT    L++HQ+ HTG KP++CKECGK F +++ + GH +A+H G +P++C ECGKSF+  S++I H
Sbjct:  248 TDERPHECQESVKAFRPSAHLIQHWRIHTGDKPYECKECGKSFTSGSTLNQHQQIHTGEKPYHCKQCGKSFTVGSTLIRH-QQIHTGEKPYDCKECGKSFASGSALIRHQRIHTGEKPYDCKECGKSFTFHSALIRHQRIHTGEKPYDCKECGKSFTFRSGLIGH-QAIHTGEKPYDCKECGKSFTAGSTLIQH 439

HSP 2 Score: 121.324 bits (303), Expect = 1.558e-29
Identity = 61/144 (42.36%), Postives = 91/144 (63.19%), Query Frame = 0

Query:  273 ENNLVENQTNKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            ++  +      + C+ECGK +++   L  H   IH     + C+ECGK+F       RH++IH G K + C+ECGKSF     LL+HQ+ HTG KP+ CKECGK F +++ + GH +AVH G +P++C ECGKSF+ +S++I H
Sbjct:  438 QHQRIHTGEKPYDCKECGKSFASGSALLQH-QRIHTGEKPYCCKECGKSFTFRSTRNRHQRIHTGEKPYNCKECGKSFASGSALLQHQRIHTGEKPYHCKECGKSFTFRSGLIGH-QAVHTGEKPYDCKECGKSFTSRSALIQH 579

HSP 3 Score: 119.398 bits (298), Expect = 7.113e-29
Identity = 57/133 (42.86%), Postives = 88/133 (66.17%), Query Frame = 0

Query:  284 FQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            + C+ECGK +++  TL I    +H     ++C+ECGK+F     L +H  +H G K + C+ECGKSFT R  L++HQ+ HTG KP+ CKECGK FA+++++  H + +H G +P++C ECGK+F  +S +  H
Sbjct:  785 YDCKECGKSFTSHSTL-IQHQPLHTGEKPYHCKECGKSFTLRSALIQHRPVHTGEKRYSCKECGKSFTSRSTLIEHQRIHTGEKPYHCKECGKSFAFRSAIIQH-RRIHTGEKPYDCKECGKAFRRRSKLTQH 915

HSP 4 Score: 113.62 bits (283), Expect = 5.359e-27
Identity = 62/148 (41.89%), Postives = 95/148 (64.19%), Query Frame = 0

Query:  274 NNLVENQTN-----KFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            + L+++Q N      +  +ECGK +++  TL I    IH     ++C+ECGK+F +   L +H++IH G KL+ C+ECGKSFT    L++HQ  HTG KP+ CKECGK F  ++++  H + VH G + + C ECGKSF+ +S++I H
Sbjct:  714 SGLIQHQQNHTDEKPYDGKECGKSFTSHSTL-IQHQQIHTGEKPYDCKECGKSFTSHSTLIQHQQIHTGEKLYDCKECGKSFTSHSTLIQHQPLHTGEKPYHCKECGKSFTLRSALIQH-RPVHTGEKRYSCKECGKSFTSRSTLIEH 859

HSP 5 Score: 108.612 bits (270), Expect = 2.599e-25
Identity = 56/145 (38.62%), Postives = 86/145 (59.31%), Query Frame = 0

Query:  272 NENNLVENQTNKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            N +  +      + C+ECGK +++   L  H   IH     ++C+ECGK+F     L  H+ +H G K + C+ECGKSFT R  L++HQ+ HTG KP+ CKECGK F   +++  H + +H G +P++C ECGK+F  +  +  H
Sbjct:  493 NRHQRIHTGEKPYNCKECGKSFASGSALLQH-QRIHTGEKPYHCKECGKSFTFRSGLIGHQAVHTGEKPYDCKECGKSFTSRSALIQHQRIHTGEKPYHCKECGKSFTVGSTLLQH-QQIHTGEKPYDCKECGKAFRLRLRLTQH 635

HSP 6 Score: 108.227 bits (269), Expect = 4.038e-25
Identity = 58/166 (34.94%), Postives = 92/166 (55.42%), Query Frame = 0

Query:  251 VNDSPLSSLSIENSKKTLEKANENNLVENQTNKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
              + P        + +   K  ++  +      ++C ECGK +     L  H ++IH     + C+ CGK+F    +L  H++IH G + + C+ECGKSFT    L++HQ+THTG KP++CKECGK F   + +  H K +H G + ++CPECGK+F + S +  H
Sbjct:  892 TGEKPYDCKECGKAFRRRSKLTQHQRIHTGEKPYRCHECGKAFVRFSGLTKH-HSIHTGEKPYECKTCGKSFRQRTHLTLHQRIHTGDRPYECKECGKSFTCGSELIRHQRTHTGEKPYDCKECGKAFRCPSQLSQH-KRIHTGEKTYQCPECGKAFFYASGLSRH 1055

HSP 7 Score: 107.071 bits (266), Expect = 8.887e-25
Identity = 61/151 (40.40%), Postives = 91/151 (60.26%), Query Frame = 0

Query:  271 ANENNLVENQT-----NKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            A+ + L+ +Q        + C+ECGK ++    L  H   IH     ++C+ECGK+F     L  H+ IH G K + C+ECGKSFT    L++HQ+ HTG KP++CKECGK FA  +++  H + +H G +P+ C ECGKSF+ +S+   H
Sbjct:  347 ASGSALIRHQRIHTGEKPYDCKECGKSFTFHSALIRH-QRIHTGEKPYDCKECGKSFTFRSGLIGHQAIHTGEKPYDCKECGKSFTAGSTLIQHQRIHTGEKPYDCKECGKSFASGSALLQHQR-IHTGEKPYCCKECGKSFTFRSTRNRH 495

HSP 8 Score: 107.071 bits (266), Expect = 9.052e-25
Identity = 58/147 (39.46%), Postives = 88/147 (59.86%), Query Frame = 0

Query:  270 KANENNLVENQTNKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            +  ++  +      +QCQECGK + +   L  H + IH     + C +CGK F    YL +H +IH G K + C+ECGKSFT    L++HQ+ HT  KP++ KECGK F   +++  H + +H G +P++C ECGKSF+  S++I H
Sbjct:  631 RLTQHQQIHTGEKPYQCQECGKAFVSVSGLTQH-HRIHTGEKPYECPDCGKAFRQRTYLNQHRRIHTGEKPYECKECGKSFTFCSGLIQHQQNHTDEKPYDGKECGKSFTSHSTLIQH-QQIHTGEKPYDCKECGKSFTSHSTLIQH 775

HSP 9 Score: 106.686 bits (265), Expect = 1.097e-24
Identity = 56/144 (38.89%), Postives = 87/144 (60.42%), Query Frame = 0

Query:  273 ENNLVENQTNKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            ++  V     ++ C+ECGK +++  TL I    IH     ++C+ECGK+FA    + +H +IH G K + C+ECGK+F +R  L +HQ+ HTG KP+ C ECGK F   + +  H  ++H G +P+EC  CGKSF  ++ +  H
Sbjct:  830 QHRPVHTGEKRYSCKECGKSFTSRSTL-IEHQRIHTGEKPYHCKECGKSFAFRSAIIQHRRIHTGEKPYDCKECGKAFRRRSKLTQHQRIHTGEKPYRCHECGKAFVRFSGLTKH-HSIHTGEKPYECKTCGKSFRQRTHLTLH 971

HSP 10 Score: 106.686 bits (265), Expect = 1.225e-24
Identity = 55/143 (38.46%), Postives = 87/143 (60.84%), Query Frame = 0

Query:  274 NNLVENQTNKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            +  V      + C+ECGK +++   L I    IH     ++C+ECGK+F     L +H++IH G K + C+ECGK+F  R  L +HQ+ HTG KP++C+ECGK F   + +  H + +H G +P+ECP+CGK+F  ++ +  H
Sbjct:  551 HQAVHTGEKPYDCKECGKSFTSRSAL-IQHQRIHTGEKPYHCKECGKSFTVGSTLLQHQQIHTGEKPYDCKECGKAFRLRLRLTQHQQIHTGEKPYQCQECGKAFVSVSGLTQHHR-IHTGEKPYECPDCGKAFRQRTYLNQH 691

HSP 11 Score: 105.916 bits (263), Expect = 1.902e-24
Identity = 64/174 (36.78%), Postives = 95/174 (54.60%), Query Frame = 0

Query:  250 IVNDSPLSSLSIENSKKTLEKA--NENNLVENQT-----NKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            ++   P+ +     S K   K+  + + L+E+Q        + C+ECGK ++    + I    IH     ++C+ECGK F     L +H++IH G K + C ECGK+F +   L KH   HTG KP+ECK CGK F  +  +  H + +H G RP+EC ECGKSF+  S +I H
Sbjct:  828 LIQHRPVHTGEKRYSCKECGKSFTSRSTLIEHQRIHTGEKPYHCKECGKSFAFRSAI-IQHRRIHTGEKPYDCKECGKAFRRRSKLTQHQRIHTGEKPYRCHECGKAFVRFSGLTKHHSIHTGEKPYECKTCGKSFRQRTHLTLHQR-IHTGDRPYECKECGKSFTCGSELIRH 999

HSP 12 Score: 102.449 bits (254), Expect = 3.038e-23
Identity = 56/144 (38.89%), Postives = 77/144 (53.47%), Query Frame = 0

Query:  273 ENNLVENQTNKFQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            ++  +      + C+ECGK +     L  H   IH     + C ECGK F     L +H  IH G K + C+ CGKSF QR  L  HQ+ HTG +P+ECKECGK F   + +  H +  H G +P++C ECGK+F   S +  H
Sbjct:  886 QHRRIHTGEKPYDCKECGKAFRRRSKLTQH-QRIHTGEKPYRCHECGKAFVRFSGLTKHHSIHTGEKPYECKTCGKSFRQRTHLTLHQRIHTGDRPYECKECGKSFTCGSELIRHQR-THTGEKPYDCKECGKAFRCPSQLSQH 1027

HSP 13 Score: 102.064 bits (253), Expect = 4.106e-23
Identity = 55/133 (41.35%), Postives = 81/133 (60.90%), Query Frame = 0

Query:  284 FQCQECGKFYSTEKTLKIHINTIHEENGHFNCEECGKTFATLIYLKRHEKIH-GVKLHICEECGKSFTQRCILLKHQKTHTGVKPFECKECGKRFAYKASVFGHIKAVHKGLRPFECPECGKSFSHKSSMIHH 415
            + C+ECGK +     L  H   IH     + C+ECGK F ++  L +H +IH G K + C +CGK+F QR  L +H++ HTG KP+ECKECGK F + + +  H +  H   +P++  ECGKSF+  S++I H
Sbjct:  617 YDCKECGKAFRLRLRLTQH-QQIHTGEKPYQCQECGKAFVSVSGLTQHHRIHTGEKPYECPDCGKAFRQRTYLNQHRRIHTGEKPYECKECGKSFTFCSGLIQH-QQNHTDEKPYDGKECGKSFTSHSTLIQH 747

The following BLAST results are available for this feature:

BLAST of TCONS_00070729-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070729-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZN850	5.832e-33	36.08	Zinc finger protein 850 OS=Homo sapiens GN=ZNF850 ...	[more]

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TCONS_00070729-protein (polypeptide) - C. hemisphaerica