TCONS_00070681-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070681-protein
Unique NameTCONS_00070681-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length426

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070681-protein ID=TCONS_00070681-protein|Name=TCONS_00070681-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
MSGGLYGGDEVGAVVFDIGSSSTRVGFAGEDIPKSDICSTIGIIKENEAM
DIDNETTKPANRRYHFDPQHYLPLANKEMVNFVRDGMIHDWDLLEKLLNH
CYKDHIRDAADQHPVLMSEAPWNTKEKREKLTELMFEKYNIPAFFLCKNA
VLSCFAHGRSTSLIVDSGATHTSAVPVHDGFVLQKGVIRSPLAGDLLTAQ
CLELMDSWNVDVVPAYMVKSKEEVEESEAAKYIARELPELTESYKQFMKR
EVMKDFQKSVLQVSDSPFVRNELDVVPSALYEFPNGLNKHIGVDRFRISE
TLFDTSHMNNIKGFENTTLLGAPHVISTSIGMCDMDIRTGLYNSVIVVGG
STLVNGFVERLNRELLQKTPNNMRLKLVSNNQASERRYSSWIGGSILASL
GSFQQMWVSKQEYEESGKTIVEKKCP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043973XLOC_043973Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070681TCONS_00070681Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR004001Actin_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPRINTSPR00190ACTINcoord: 96..114
score: 30.66
coord: 152..171
score: 43.63
coord: 127..140
score: 55.57
IPR004000Actin familySMARTSM00268actin_3coord: 11..426
e-value: 8.4E-120
score: 414.0
IPR004000Actin familyPFAMPF00022Actincoord: 8..425
e-value: 2.5E-140
score: 467.6
NoneNo IPR availableGENE3D3.30.420.40coord: 9..425
e-value: 1.1E-84
score: 284.5
NoneNo IPR availableCDDcd00012NBD_sugar-kinase_HSP70_actincoord: 14..202
e-value: 1.20599E-14
score: 70.3103
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 243..425
coord: 159..210
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 9..165
IPR004001Actin, conserved sitePROSITEPS00432ACTINS_2coord: 407..415

Blast
[Close]
BLAST of TCONS_00070681-protein vs. Swiss-Prot (Human)
Match: ACL6A (Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE=1 SV=1)

HSP 1 Score: 524.242 bits (1349), Expect = 0.000e+0
Identity = 248/432 (57.41%), Postives = 316/432 (73.15%), Query Frame = 0 
Query:    1 MSGGLYGGDEVGAVVFDIGSSSTRVGFAGEDIPKSDICSTIGIIKENE----AMDIDNETTKPANRRYHFDPQHY-LPLANKEMVNFVRDGMIHDWDLLEKLLNHCYKDHIRDAADQHPVLMSEAPWNTKEKREKLTELMFEKYNIPAFFLCKNAVLSCFAHGRSTSLIVDSGATHTSAVPVHDGFVLQKGVIRSPLAGDLLTAQCLELMDSWNVDVVPAYMVKSKEEVEESEAAKYIARE-LPELTESYKQFMKREVMKDFQKSVLQVSDSPFVRNELDVVPSALYEFPNGLNKHIGVDRFRISETLFDTSHMNNIKGFENTTLLGAPHVISTSIGMCDMDIRTGLYNSVIVVGGSTLVNGFVERLNRELLQKTPNNMRLKLVSNNQASERRYSSWIGGSILASLGSFQQMWVSKQEYEESGKTIVEKKCP 426
            MSGG+YGGDEVGA+VFDIGS + R G+AGED PK D  + IG++ E +     M+ID +  K     Y+ D     +P  N E ++ +++GM+ DWD  + +L+H YK H++  A  HPVLMSEAPWNT+ KREKLTELMFE YNIPAFFLCK AVL+ FA+GRST LI+DSGATHT+A+PVHDG+VLQ+G+++SPLAGD +T QC EL    N+++VP YM+ SKE V E   A +  +E LP++T S+  +M   V++DFQ SVLQVSDS +       +P+  YEFPNG N   G +R +I E LFD S   N+KG    T+LG  HV++TS+GMCD+DIR GLY SVIV GG+TL+  F +RLNREL QKTP +MRLKL++NN   ERR+SSWIGGSILASLG+FQQMW+SKQEYEE GK  VE+KCP
Sbjct:    1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPS---NVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP 429
The following BLAST results are available for this feature:
BLAST of TCONS_00070681-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACL6A0.000e+057.41Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE... [more]
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