TCONS_00070673-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070673-protein
Unique NameTCONS_00070673-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length291

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070673-protein ID=TCONS_00070673-protein|Name=TCONS_00070673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MVDRLANTEENNRRMKHVEDCFGTSGQSLVSVGRVLVGEGVLTKLCRKKP
KPRQFFLFNDILVYGTILISKKKYANQHIIPLQEVKIITLEDDGNFKNGW
QIISPSKSFAVYAATPTEKAEWMAHINKCINDLLKKTGKKPSGEEAAVWV
PDQSANVCMLCQKTKFTTIVRKHHCRRCGSVVCGNCSSKRFLIPHISSKP
VRVCDQCYDKMSSGAVKPDEPFNKSTEGKIRADSKNSLSRNEAEKLAESG
SSAEESDGEEENGDMQQPTSFYEEGEESKEPARPNDPPAAT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043970XLOC_043970Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070673TCONS_00070673Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR000306Znf_FYVE
IPR011993PH_dom-like
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 36..133
e-value: 5.9E-13
score: 59.0
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 39..130
e-value: 6.3E-9
score: 36.2
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 35..131
score: 11.122
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 144..213
e-value: 2.1E-29
score: 113.7
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 148..212
e-value: 4.0E-19
score: 68.4
IPR011993PH domain-likeGENE3D2.30.29.30coord: 3..137
e-value: 2.9E-25
score: 88.0
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 9..130
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 138..216
e-value: 5.2E-23
score: 80.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..291
NoneNo IPR availableCDDcd15717FYVE_PKHFcoord: 148..208
e-value: 5.11472E-39
score: 131.72
NoneNo IPR availableCDDcd01218PH_Phafin2-likecoord: 7..129
e-value: 4.44048E-79
score: 237.155
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 152..212
score: 13.1
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 148..212

Blast
[Close]
BLAST of TCONS_00070673-protein vs. Swiss-Prot (Human)
Match: PKHF2 (Pleckstrin homology domain-containing family F member 2 OS=Homo sapiens GN=PLEKHF2 PE=1 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 4.113e-113
Identity = 149/221 (67.42%), Postives = 176/221 (79.64%), Query Frame = 0 
Query:    1 MVDRLANTEENNRRMKHVEDCFGTSGQSLVSVGRVLVGEGVLTKLCRKKPKPRQFFLFNDILVYGTILISKKKYANQHIIPLQEVKIITLEDDGNFKNGWQIISPSKSFAVYAATPTEKAEWMAHINKCINDLLKKTGKKPSGEEAAVWVPDQSANVCMLCQKTKFTTIVRKHHCRRCGSVVCGNCSSKRFLIPHISSKPVRVCDQCYDKMSSGAVKPDEP 221
            MVDRLAN+E N RR+  VE+CFG +GQ L   GRVL+GEGVLTKLCRKKPK RQFFLFNDILVYG I+I KKKY  QHIIPL+ V I +++D+G+ +NGW I +P+KSFAVYAAT TEK+EWM HINKC+ DLL K+GK PS E AAVWVPD  A VCM CQK KFT + R+HHCR+CG VVCG CS KRFL+P  SSKPVR+CD CYD +S+G +   +P
Sbjct:    1 MVDRLANSEANTRRISIVENCFGAAGQPLTIPGRVLIGEGVLTKLCRKKPKARQFFLFNDILVYGNIVIQKKKYNKQHIIPLENVTIDSIKDEGDLRNGWLIKTPTKSFAVYAATATEKSEWMNHINKCVTDLLSKSGKTPSNEHAAVWVPDSEATVCMRCQKAKFTPVNRRHHCRKCGFVVCGPCSEKRFLLPSQSSKPVRICDFCYDLLSAGDMATCQP 221
The following BLAST results are available for this feature:
BLAST of TCONS_00070673-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKHF24.113e-11367.42Pleckstrin homology domain-containing family F mem... [more]
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