TCONS_00070623-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070623-protein
Unique NameTCONS_00070623-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length644

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070623-protein ID=TCONS_00070623-protein|Name=TCONS_00070623-protein|organism=Clytia hemisphaerica|type=polypeptide|length=644bp
MNRQLSYTSNQMNADGCFTGSYQLRNGNSLNKDIVNEVKSAFDQFDLDHN
GHITSSELGSIFQALGESVPGYKLREMIAEVDTDKNGTVEFNEFIEMYCK
VSSKGVFGQWTSLVTRREGIKVQGGTTEASAEGTTHTSSDAEQLAFKDWI
NSQLREDADCRQYLPIEAANLFERLKDGIIFCKMINLSAPKTIDERAINK
GRLNAFLIQENNLLVINSAQAIGCSVVNVHAEDIIKGKQHLILGLLWQII
RIGLFANITLQANPNIAALLEDGESIEDLLKLSPEELLLRWVNYHLRKSG
SNKRINNFSGDIKDSEAYAILLNQISPQEFGVDRPERTMQIGDSTKRADL
ILKNADKIGCRKFVTAKDIVGGNSKLNLAFVANLFNHFPTLDPNDIEEDV
EYEPYEESREEKTYRNWMNSLGVNPFVYHLYNDLSNGLVLFQLYEDIRKG
TVNWDKVNKAPFKLATGGNMKKIENCNYAVQLGKIKNSYSLVGIGGEDIY
NGTPTLVLALIWQMLRDYTTRMLASLTKQDGSKITDGAIVDWVNNKLNSC
NKRTRIANFKDPTISTSLAVIDLVDSIKPGSVDYSLVTEGHSDEDKELNA
QYAISMSRKIGAKTYALPEDLVEVKPKMVLTVFACLMTRGLQPN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043944XLOC_043944Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070623TCONS_00070623Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR001715CH-domain
IPR001589Actinin_actin-bd_CS
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 37..65
e-value: 5.1E-4
score: 29.4
coord: 73..101
e-value: 1.0E-4
score: 31.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 38..98
e-value: 3.0E-12
score: 46.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 73..104
score: 11.166
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 33..68
score: 13.258
IPR002048EF-hand domainCDDcd00051EFhcoord: 37..97
e-value: 3.44172E-17
score: 76.0473
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 410..517
e-value: 2.1E-19
score: 80.5
coord: 142..252
e-value: 1.4E-20
score: 84.3
coord: 284..387
e-value: 3.0E-19
score: 80.0
coord: 535..639
e-value: 2.5E-17
score: 73.6
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 124..252
e-value: 6.2E-25
score: 87.0
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 527..639
e-value: 5.5E-21
score: 74.2
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 407..526
e-value: 1.3E-24
score: 85.9
IPR001715Calponin homology domainPFAMPF00307CHcoord: 410..516
e-value: 1.1E-17
score: 64.1
coord: 143..252
e-value: 1.8E-22
score: 79.5
coord: 283..389
e-value: 8.4E-20
score: 70.9
coord: 538..639
e-value: 1.5E-16
score: 60.4
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 278..390
e-value: 8.0E-23
score: 80.0
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 408..519
score: 15.523
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 533..641
score: 13.698
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 282..389
score: 15.993
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 140..254
score: 18.102
IPR001715Calponin homology domainCDDcd00014CHcoord: 283..389
e-value: 1.14337E-19
score: 84.2847
IPR001715Calponin homology domainCDDcd00014CHcoord: 145..254
e-value: 8.44418E-22
score: 90.4479
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 139..637
NoneNo IPR availableGENE3D1.10.238.10coord: 86..122
e-value: 0.0013
score: 18.1
NoneNo IPR availableGENE3D1.10.238.10coord: 5..51
e-value: 2.2E-5
score: 23.7
NoneNo IPR availableGENE3D1.10.238.10coord: 52..85
e-value: 3.5E-16
score: 58.5
IPR001589Actinin-type actin-binding domain, conserved sitePROSITEPS00019ACTININ_1coord: 410..419
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 82..94
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 46..58
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 29..101

Blast
[Close]
BLAST of TCONS_00070623-protein vs. Swiss-Prot (Human)
Match: PLST (Plastin-3 OS=Homo sapiens GN=PLS3 PE=1 SV=4)

HSP 1 Score: 662.529 bits (1708), Expect = 0.000e+0
Identity = 341/626 (54.47%), Postives = 448/626 (71.57%), Query Frame = 0 
Query:   30 LNKDIVNEVKSAFDQFDLDHNGHITSSELGSIFQALGESVPGYKLREMIAEV----DTDKNGTVEFNEFIEMYCKVSSKGVFGQWTSLVTRREGIKVQGGTTEASAEGTTHTSSDAEQLAFKDWINSQLREDADCRQYLPIE--AANLFERLKDGIIFCKMINLSAPKTIDERAINKGRLNAFLIQENNLLVINSAQAIGCSVVNVHAEDIIKGKQHLILGLLWQIIRIGLFANITLQANPNIAALLEDGESIEDLLKLSPEELLLRWVNYHLRKSGSNKRINNFSGDIKDSEAYAILLNQISP--QEFGVDRPERTMQ---IGDSTKRADLILKNADKIGCRKFVTAKDIVGGNSKLNLAFVANLFNHFPTLDPNDIEEDVEYEPYE-ESREEKTYRNWMNSLGVNPFVYHLYNDLSNGLVLFQLYEDIRKGTVNWDKVNKAPFKLATGGNMKKIENCNYAVQLGKIKNSYSLVGIGGEDIYNGTPTLVLALIWQMLRDYTTRMLASLTKQDGSKITDGAIVDWVNNKLNSCNKRTRIANFKDPTISTSLAVIDLVDSIKPGSVDYSLVTEGH-SDEDKELNAQYAISMSRKIGAKTYALPEDLVEVKPKMVLTVFACLMTRGLQ 642
            ++KD ++E+K AF + DL+ NG I   EL  +F+     +PGYK+RE+I ++    D +K+G + F+EF+ ++ +V S  +   +   + R+EGI   GGT+E S+EGT H+ S+ E+ AF +WIN  L  D DCR  +P+     +LF+ + DGI+ CKMINLS P TIDERAINK +L  F+IQEN  L +NSA AIGC VVN+ AED+  GK HL+LGLLWQII+IGLFA+I L  N  +AALL DGE++E+L+KLSPEELLLRW N+HL  SG  K INNFS DIKDS+AY  LLNQI+P  Q+ G  R +  M      D  KRA+ +L+ ADK+GCR+FVT  D+V GN KLNLAFVANLFN +P L   +  +D+++   E E+REE+T+RNWMNSLGVNP V HLY DL + LV+ QLYE I K  V+W KVNK P+    G NMKK+ENCNYAV+LGK    +SLVGIGG+D+ +G  TL LAL+WQ++R YT  +L  L   DG K  D  IV+WVN  L+   K T I +FKD TIS+SLAV+DL+D+I+PG ++Y LV  G+ +++DK  NA+YA+SM+R+IGA+ YALPEDLVEVKPKMV+TVFACLM RG++
Sbjct:    9 ISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMLDGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEGICALGGTSELSSEGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQK-INNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANLFNKYPALTKPE-NQDIDWTLLEGETREERTFRNWMNSLGVNPHVNHLYADLQDALVILQLYERI-KVPVDWSKVNKPPYP-KLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQLMRRYTLNVLEDLG--DGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMK 628
The following BLAST results are available for this feature:
BLAST of TCONS_00070623-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLST0.000e+054.47Plastin-3 OS=Homo sapiens GN=PLS3 PE=1 SV=4[more]
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