TCONS_00070502-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070502-protein
Unique NameTCONS_00070502-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length133

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070502-protein ID=TCONS_00070502-protein|Name=TCONS_00070502-protein|organism=Clytia hemisphaerica|type=polypeptide|length=133bp
MVVPTQKRKLIKKRTKRFIRHQSDRYVKVAESWRKPKGIDNRVRRRFKGQ
YLMPNIGYGTNAKTRHCMPDGFKKFVVHNQKELELLLMLKGTYAAEIAHN
VSARKRKDIVERANQLSIKVTNATARLRSEENE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043891XLOC_043891Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070502TCONS_00070502Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR018263Ribosomal_L32e_CS
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..133
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 15..122
e-value: 5.2E-74
score: 261.9
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 15..122
e-value: 7.8E-53
score: 177.3
IPR001515Ribosomal protein L32ePRODOMPD003823coord: 4..122
e-value: 1.0E-46
score: 465.0
IPR001515Ribosomal protein L32eCDDcd00513Ribosomal_L32_L32ecoord: 16..122
e-value: 5.20172E-51
score: 158.847
IPR001515Ribosomal protein L32eSUPERFAMILY52042Ribosomal protein L32ecoord: 2..132
IPR018263Ribosomal protein L32e, conserved sitePROSITEPS00580RIBOSOMAL_L32Ecoord: 18..38

Blast
[Close]
BLAST of TCONS_00070502-protein vs. Swiss-Prot (Human)
Match: RL32 (60S ribosomal protein L32 OS=Homo sapiens GN=RPL32 PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.015e-68
Identity = 94/130 (72.31%), Postives = 111/130 (85.38%), Query Frame = 0 
Query:    4 PTQKRKLIKKRTKRFIRHQSDRYVKVAESWRKPKGIDNRVRRRFKGQYLMPNIGYGTNAKTRHCMPDGFKKFVVHNQKELELLLMLKGTYAAEIAHNVSARKRKDIVERANQLSIKVTNATARLRSEENE 133
            P  K K++KKRTK+FIRHQSDRYVK+  +WRKP+GIDNRVRRRFKGQ LMPNIGYG+N KT+H +P GF+KF+VHN KELE+LLM   +Y AEIAHNVS++ RK IVERA QL+I+VTN  ARLRSEENE
Sbjct:    6 PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
The following BLAST results are available for this feature:
BLAST of TCONS_00070502-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RL322.015e-6872.3160S ribosomal protein L32 OS=Homo sapiens GN=RPL32... [more]
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