TCONS_00070396-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070396-protein
Unique NameTCONS_00070396-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length940

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070396-protein ID=TCONS_00070396-protein|Name=TCONS_00070396-protein|organism=Clytia hemisphaerica|type=polypeptide|length=940bp
MGQGTSSETDAKLKALVSKLSKLEIKDIEAVFMELSTTTDEGQFVIQQPS
WLNRDKFAEIFGLNDLIVEQLFQTFDRDKNGIIDLQEFVTGMALCLHGGI
KEKCHLLFKIFNLNGDEGISREELSTVLTSCLMSANTLLQSTLKTEGLSA
FESQLADQTGAAVMLNVVVDKIVKEAFDTCDVSNTGKLEIDEFAKWVHKN
PKLMNNIFVLQCPKPTPSPIKSSESSFSVLTMAGQDENIPEENSKTKIEM
ARSVSQITEESTKSLLELSQETNTPTTAGDLFKETSQPSADGADFFDTLG
SHNETPSQAPAGQLPRPASELFLSSGNENSNIDGLQHSTSHNDLASLKQQ
PAISHLQNAESMQSIALSRDSLAPDSHNASQELGTSTENITSLVPQHHTE
PTIQLHQENQQQTLPQVDPSSYQQQQQSPTQAQQQPPIQPPQTTMQTQYQ
QQQKTDHSQSFDNPALALETEVNNEVFPEQPAVIQNTILDNSQVYNDKLV
DPAQEQRRRGCSFWQPSTNTERLLQQYKQGAIPEMNVLTSPSVLVENLMG
DPVKDLVRKYLGEQEANKRPTLMANQVEMNENGLRRLLAAGCWRAAVDFT
TKYLTAHGQGLVSMGQNQRSNLSPSILQIWFVRIALLVKLRMFSSAEAEL
NAFKEFDAPDLYYQYYPELYQGKKKGSIVPFSLRLIHAELPQHNGRPNVA
LDRLYALLEKVDQVLGHLEQGLSEDGTQWPETQDENEMKGLADLWKLRRL
RLHYAIGNCFSTMKEYILAIELYEECANLQPENEIAILSGIGRIYLQLGD
LRSAQKYFTKVEVLTKDSTNVKLNNMVTMNSGYHALANGKYNDSYQFFTT
AMKNDADNFTACNNAAVCLLFLGMVKEASNLLENMVWRSPNRSLHEDILF
NLNTVYELETSRALQKKHKILDLVCQHKGDGFNTQCLKLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043843XLOC_043843Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070396TCONS_00070396Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR018247EF_Hand_1_Ca_BS
IPR013026TPR-contain_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 103..131
e-value: 15.0
score: 8.3
coord: 67..95
e-value: 4.3E-5
score: 32.9
coord: 172..200
e-value: 1.2
score: 17.1
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 68..93
e-value: 4.7E-6
score: 25.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 63..98
score: 13.258
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 168..203
score: 9.939
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 99..134
score: 8.321
IPR002048EF-hand domainCDDcd00051EFhcoord: 68..124
e-value: 1.28222E-5
score: 42.9201
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 785..818
e-value: 7.2
score: 15.6
coord: 825..858
e-value: 450.0
score: 0.5
coord: 750..783
e-value: 0.017
score: 24.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 750..783
score: 9.322
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 785..818
score: 8.319
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 825..858
score: 6.077
NoneNo IPR availableGENE3D1.10.238.10coord: 83..117
e-value: 9.3E-13
score: 47.3
NoneNo IPR availableGENE3D1.10.238.10coord: 118..185
e-value: 2.2E-7
score: 30.6
NoneNo IPR availableGENE3D1.10.238.10coord: 3..82
e-value: 4.9E-7
score: 29.2
NoneNo IPR availableGENE3D1.25.40.120coord: 560..797
e-value: 3.8E-10
score: 38.9
NoneNo IPR availablePFAMPF13424TPR_12coord: 751..811
e-value: 2.9E-7
score: 30.6
NoneNo IPR availableGENE3D1.10.238.10coord: 186..364
e-value: 0.011
score: 15.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..339
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 798..924
e-value: 2.7E-12
score: 46.0
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 751..890
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 76..88
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 181..193
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 750..892
score: 17.076
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..207

Blast
[Close]
BLAST of TCONS_00070396-protein vs. Swiss-Prot (Human)
Match: TPC12 (Trafficking protein particle complex subunit 12 OS=Homo sapiens GN=TRAPPC12 PE=1 SV=3)

HSP 1 Score: 358.607 bits (919), Expect = 5.285e-111
Identity = 191/431 (44.32%), Postives = 273/431 (63.34%), Query Frame = 0 
Query:  514 WQPSTNTERLLQ----QYKQGAIPEMNVLTSPSVLVENLMGDPVKDLVRKYLGEQEANKRPTLMANQVEMNENGLRRLLAAGCWRAAVDFTTKYLTAHGQGLVSMGQNQRSNLSPSILQIWFVRIALLVKLRMFSSAEAELNAFKEFDAPDLYYQYYPELYQGKKKGSIVPFSLRLIHAELPQHNGRPNVALDRLYALLEKVDQVLGHLEQGLSEDGTQWPETQDENEMKGLADLWKLRRLRLHYAIGNCFSTMKEYILAIELYEECANLQPENEIAILSGIGRIYLQLGDLRSAQKYFTKVEVLTKDSTNVKLNNMVTMNSGYHALANGKYNDSYQFFTTAMKNDADNFTACNNAAVCLLFLGMVKEASNLLENMVWRSPNRSLHEDILFNLNTVYELETSRALQKKHKILDLVCQHKGDGFNTQCLKLS 940
            W P   T  +L+    Q +     +   LT P +  +N+ GD VKDL+ ++LGE+ A KR  L A+ VE +  GL++L++   WRAAVD   + LTAHGQG    G    ++ +   LQ+WFVR+ALLVKL +F +AE E   F   D PDLYY+YYP +Y G++ GS+VPFS+R++HAEL Q+ G P  +LDRL+ +     ++L +LEQGL+EDG     TQ+  +      LW+ R  R+ Y++ NC   MK+Y+LA+E Y       PE E  +LSGIGRI LQ+GD+++A+KYF  VE +T+    ++   MV MNS +  L    + ++++FFT  ++ D  N  A NNAAVCLL+LG +K++   LE MV + P   LHE +LFNL T+YELE+SR++QKK  +L+ V   +GD FNTQCLKL+
Sbjct:  310 WLPGEATRGVLRAVATQQRGAVFVDKENLTMPGLRFDNIQGDAVKDLMLRFLGEKAAAKRQVLNADSVEQSFVGLKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGL--LTSHTTDSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRR-GSMVPFSMRILHAELQQYLGNPQESLDRLHKVKTVCSKILANLEQGLAEDGGMSSVTQEGRQAS--IRLWRSRLGRVMYSMANCLLLMKDYVLAVEAYHSVIKYYPEQEPQLLSGIGRISLQIGDIKTAEKYFQDVEKVTQKLDGLQGKIMVLMNSAFLHLGQNNFAEAHRFFTEILRMDPRNAVANNNAAVCLLYLGKLKDSLRQLEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQALLEAVAGKEGDSFNTQCLKLA 735
The following BLAST results are available for this feature:
BLAST of TCONS_00070396-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPC125.285e-11144.32Trafficking protein particle complex subunit 12 OS... [more]
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