TCONS_00070352-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070352-protein
Unique NameTCONS_00070352-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070352-protein ID=TCONS_00070352-protein|Name=TCONS_00070352-protein|organism=Clytia hemisphaerica|type=polypeptide|length=162bp
MTVFQCLLCSSFQTLLLRRLMNHYNVVHANELNFNVKCNVSGCPLVFRRY
NSYYKHVVRNHTSVYNLPSDNTPGNENFLNNIESEQNDHEEEIGVDGEEE
NIVEEEIYDNAEEGDEPDSFDSSSNDEDELDQQNQEYEDDNVSFCLYFAI
LAIGIVWVFKYC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043819XLOC_043819Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070352TCONS_00070352Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..136
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 36..61
e-value: 0.18
score: 20.9
coord: 4..28
e-value: 30.0
score: 9.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 38..61

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070352-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top