TCONS_00070205-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070205-protein
Unique NameTCONS_00070205-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1303

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070205-protein ID=TCONS_00070205-protein|Name=TCONS_00070205-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1303bp
MNINTGGGFNNTGGLGVANIPPQVPQQMQQVQQQQQPIQQQVTDNMQLNM
EQHIQQTNSRLQIIQRDLNNAATFQSAARELLDWCGDARAFQQSYEPNLM
NCLTVVSKVASMQGYDLRLGYRLLAVCSAHKEKLSQKSSTILTQWSEELG
RLLLLRHQNESNGKPNFNANQMKPMPAPMARGDSTIAWQPNSQQQQQTNV
SVTVSSVWGVSSTPSVNQPMNTGNAGGGGGGMNQQGGQTFDQSGGNNQQM
KNMNNQPGFNNSNNGVGVQRNDMNVVSNVMLQRQGSNVQINQQTNVNANN
QGSTSFSTQFTQSGPQNQNNVSGPFPAAAAAAAAVAAAAATATATATATA
TLQMQEQPQPDQMNRGDMMDNQQQQYQIQGQTNVQTGRGMINNTINGSMN
RQMFNKPMGYMMNNPNNMTQYMTSQQRNFMNQGMNRNMMSRFQGPQLKRP
PMMGGYGNNMMTSPMTPDPPNGQFSPYGPPGGMNRSGPGFPPQYQQPPPG
YNGNNFNANMGGANMGGMGGMNMGMNNSMGMSGNNSMGMGSNMGLPPQYN
NNMNNTMGNNMMQQPQQPQQPQQQVFNQQQQMQQGGQPTPNNLQQPNNQA
QRTPQLLQQQRLQQQRLQQQTMNNQQNVVNPQQQQQQQQQQPPNQQVGSP
QQALTNQERPSTLQYQPNPTTGGPRTPNPPAASPLNRMAVDGATTPIIPN
ARSTTPRQDIKDVKPQIAGEAQKLKSLNRAPSTGPSPPDVKPNISQIKTE
KECLRLTFSVANGIVLPPFRLQHNLAVSNHAFSLKPQIYQTLMNRPDLEL
QFKCYHHEDKTMTTNWPQTVSVSVNNTPLNLERGDSKTSHKPLLLKDVCK
AGRNTIQINVLACCCSHLFVLQLVHRPSVNSVLQGLLKKRLLPAEHCMKK
IKINFKSSATNSNTPGMDDGIEQTAVKVSLKCPITYRCITIPARGHDCKH
IQCFDLESYLKLNVDKGSWKCPVCSKNAILEGLEVDQYLWQIITTLMKTD
VEEVTIDSSASWKPVSTPIKQEIKSEDDSMSCSGTPGPPPKRLRSVDSAI
ASPMSITNPSTPGSYKPPTPAARPCTPSSTPGPKTPQPQANPSIMTSSNN
DSKFRAPSPAMHPASSQPQLLRQQSQSMTSPSPVTCNLTAAQGGPPTLMR
SPDAPLPQSIPPTSSPPTISTSSALTSPNSANAXSPPTISTSSALTSQNS
ESANARTPTTTSGSSNNAVHDWSNTDFIDSMFNAAKEAGEGHEGEGEGET
LDVLPDNLDERELLSYLGPPDEEFIMSMFDGINNSAQNTPTSNNQTNSSN
DFV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043725XLOC_043725Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070205TCONS_00070205Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004181Znf_MIZ
IPR015943WD40/YVTN_repeat-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004181Zinc finger, MIZ-typePFAMPF02891zf-MIZcoord: 928..977
e-value: 1.6E-21
score: 75.7
IPR004181Zinc finger, MIZ-typePROSITEPS51044ZF_SP_RINGcoord: 917..994
score: 41.295
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 557..1240
e-value: 9.6E-21
score: 73.3
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 21..323
e-value: 1.4E-5
score: 23.1

Blast
[Close]
BLAST of TCONS_00070205-protein vs. Swiss-Prot (Human)
Match: ZMIZ1 (Zinc finger MIZ domain-containing protein 1 OS=Homo sapiens GN=ZMIZ1 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 4.167e-29
Identity = 127/320 (39.69%), Postives = 165/320 (51.56%), Query Frame = 0 
Query:   49 NMEQHIQQTNSRLQIIQRDLNNAATFQSAARELLDWCGDARAFQQSYEPNLMNCLTVVSKVASMQGYDLRLGYRLLAVCSAHKEKLSQKSSTILTQWSEELGRLLLLRHQNESNGKPNFNA------NQMKPMPAPMARGD-----STIAWQPNSQQQQQTNVSVTVSSVWGVSSTPS---VNQPMNTGNAGGGGGGMNQQGGQTFDQSGGNNQQMKNMNNQPGFNNSNNGVGVQRNDMNVVSNVMLQRQGSNVQINQQTNVNANNQGSTSFSTQFTQSGPQNQNNVSGP--------F--PAAAAAAAAVAAAAATATA 344
            +M++HIQQTN RLQ I++ L N A F +AA ELLDWCGD RAFQ+ +E +LM CLTVVS+VA+ QG+DL LGYRLLAVC+A+++K + KS+ +L+ W EELGRLLLLRHQ      P          + M  M   ++  D      ++ WQ N+ Q   + +SV V++VWGV++T     +  PM   N     GG     G T    G N+ Q      Q                         +   +   I Q      N  GS  F   +   GP     +  P        F  PAAAAAAAAVAAAAATATA
Sbjct:    3 SMDRHIQQTNDRLQCIKQHLQNPANFHNAATELLDWCGDPRAFQRPFEQSLMGCLTVVSRVAAQQGFDLDLGYRLLAVCAANRDKFTPKSAALLSSWCEELGRLLLLRHQKSRQSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGS-LSV-VTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQ----------------------FSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYP-GGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATA 297
The following BLAST results are available for this feature:
BLAST of TCONS_00070205-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZMIZ14.167e-2939.69Zinc finger MIZ domain-containing protein 1 OS=Hom... [more]
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