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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00069974-protein ID=TCONS_00069974-protein|Name=TCONS_00069974-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1437bp
MLSTQSHTDEDQERGFRCQVLLGKLDNQLRERIHKKLNTRDPAKVFQFFL
SHKATIDKLRRKNVIKDEQYKLLLPTSGMVYLDQFDSTLLFFVTREFFGE
NMKDLIKIRNRIQHGGTKVSLPEFNAILSDAEPPLLQLGLSKAEFDDICN
IWIAGSKVKKLMTKTSFNYACLPPVANHFRRANLISNIHQAVYRQHHDDF
KFSVVISGIGGSGKSETAREYWQSYRNVYYEDIVCWINCNSLVNIEKSFT
EIANRCGINQIYNQNGSAKPLKEISNLVYDYFSVRQDVNKPRKVLFVLDN
VINQAALVDLIPDTKKEAPYFLITSQCGEWDQRFDVIKIKQFSSKEAEQF
LERNIHDVDARKDKEANQKLLKSLSYLPLALQQAFSFINKNGLTVEMYLT
IFDKRQKELLSEGTQEIGNPSVYTTLSLTYNRLLQEGGQKVNDLLNKISY
LDGKVIRKGLLIKFVDDVFVLNKILSLLAKYSIIETTNTGTCFLENQINC
HELTQTFLKTYVPNVKEPVYQELANTFIEDMRNCRSQEKKMDGKYWYQHF
LFICEKDVENIFLMKLIDVQNDLIHLFETQGHMRRLSNYLKKMMEKLSHT
DGYERKDLYFKTKYNYANTLNNLSHYHDALRIFKEIETVEKDTLGERHNS
YLITKHAIGHCLMNLSHYHEALRIFKEIETVQKDTLGERHNHYLSTKHAI
GQCLENLSHYHEALRIFKEIETVEKDTLGERHNSYLITKHAIGHCLKNLS
HYHEALRIFKEIETVQKDTLGERHNHYLSTKHEIGQCLENLSHYHEALRI
FKEIETVEKDTLGERHNRYLSTKHAIGHCFMNLSHYHEALRIFKEIETVR
KDTLGERHNHYLSTKHAIGQCLKNLSHYHDALRIFKEIETVKKDTLGERH
NSYLITKHEIGQCLKNLSHYHDALRIFEEIETVRKDTLGERHNSYLITKH
AIGQCLENLSQNQDALRIFKEIETVEKDTLGERHNSYLSTKHAIGNCLMN
LSHYHDALRIFKEIETVEKDTLGERHNSYLSTKHAIGNCLMNLSHYHDAL
RIFKETESVQKDTLGERHNSYLITKHAIGNCLMNLSHYHEALRIFKEIET
VEKDTLGERHNRYLSTKHEIGQCLKNLSHYHDALRIFKEIETVQKDTLGE
RHNSYLITKHAIGQCLENLSHYHEALRIFKEIETVRKDNDYLTTKHKIGQ
CLMNLSHFEDALSIFKEIEIIDNKTIGQRHRDYLIGKIYIGECLKRMKAF
DEALQIFESSKPILSEVFGDHHDRYLRNDFHIGHVLTMKGRFNDALKILE
STQTKQIETFDKSHPEVLQTTSVIGRCLAEKGLSNKAHDTLSQTLEDGLQ
VLDKEHPIILSIRINLAHCLFGMKKIEEAMDHLTEVEEISLQRLGDHHSI
YREAVEMKEQHEQKRKQKEEGVDVSPVTEMMKSTELE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1437..1437 |
| None | No IPR available | COILS | Coil | Coil | coord: 1401..1421 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 157..329
e-value: 9.7E-6
score: 24.8 |
| None | No IPR available | GENE3D | 1.20.1250.10 | | coord: 818..884
e-value: 6.4E-6
score: 25.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1409..1437 |
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 820..853
e-value: 150.0
score: 4.6
coord: 1114..1147
e-value: 250.0
score: 2.7
coord: 904..937
e-value: 290.0
score: 2.1
coord: 946..979
e-value: 400.0
score: 0.8
coord: 1234..1267
e-value: 240.0
score: 2.8
coord: 736..769
e-value: 230.0
score: 3.1
coord: 652..685
e-value: 150.0
score: 4.7
coord: 1072..1105
e-value: 120.0
score: 5.4
coord: 1030..1063
e-value: 170.0
score: 4.3
coord: 1192..1225
e-value: 210.0
score: 3.3
coord: 862..895
e-value: 400.0
score: 0.9
coord: 1360..1393
e-value: 21.0
score: 12.1
coord: 1156..1189
e-value: 120.0
score: 5.6
coord: 610..643
e-value: 310.0
score: 1.8
coord: 988..1021
e-value: 150.0
score: 4.8
coord: 694..727
e-value: 210.0
score: 3.3
coord: 778..811
e-value: 160.0
score: 4.4 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 1337..1425
e-value: 4.2E-11
score: 42.5
coord: 1129..1178
e-value: 7.0E-5
score: 22.5
coord: 1046..1128
e-value: 3.7E-11
score: 42.7
coord: 964..1045
e-value: 3.3E-10
score: 39.6
coord: 1179..1248
e-value: 1.1E-5
score: 25.1
coord: 885..963
e-value: 5.5E-11
score: 42.1
coord: 1249..1336
e-value: 1.7E-7
score: 30.9
coord: 751..817
e-value: 8.9E-11
score: 41.4
coord: 675..750
e-value: 1.2E-10
score: 41.0 |
| IPR011990 | Tetratricopeptide-like helical domain | GENE3D | 1.25.40.10 | | coord: 565..674
e-value: 1.3E-5
score: 24.6 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 1027..1230 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 605..679 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 1312..1390 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 836..1062 |
| IPR011990 | Tetratricopeptide-like helical domain | SUPERFAMILY | 48452 | TPR-like | coord: 668..904 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 610..1225
score: 18.086 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 166..433 |
Blast
The following BLAST results are available for this feature:
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